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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2008 1
2009 1
2011 1
2013 1
2014 1
2015 5
2016 10
2017 10
2018 4
2019 6
2020 2
2023 2
2024 1

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44 results

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Page 1
Plassembler: an automated bacterial plasmid assembly tool.
Bouras G, Sheppard AE, Mallawaarachchi V, Vreugde S. Bouras G, et al. Among authors: sheppard ae. Bioinformatics. 2023 Jul 1;39(7):btad409. doi: 10.1093/bioinformatics/btad409. Bioinformatics. 2023. PMID: 37369026 Free PMC article.
Severe infections emerge from commensal bacteria by adaptive evolution.
Young BC, Wu CH, Gordon NC, Cole K, Price JR, Liu E, Sheppard AE, Perera S, Charlesworth J, Golubchik T, Iqbal Z, Bowden R, Massey RC, Paul J, Crook DW, Peto TE, Walker AS, Llewelyn MJ, Wyllie DH, Wilson DJ. Young BC, et al. Among authors: sheppard ae. Elife. 2017 Dec 19;6:e30637. doi: 10.7554/eLife.30637. Elife. 2017. PMID: 29256859 Free PMC article.
Complete genome sequence of the nematicidal Bacillus thuringiensis MYBT18247.
Hollensteiner J, Poehlein A, Spröer C, Bunk B, Sheppard AE, Rosenstiel P, Schulenburg H, Liesegang H. Hollensteiner J, et al. Among authors: sheppard ae. J Biotechnol. 2017 Oct 20;260:48-52. doi: 10.1016/j.jbiotec.2017.09.003. Epub 2017 Sep 9. J Biotechnol. 2017. PMID: 28899808 Free article.
A Candida auris Outbreak and Its Control in an Intensive Care Setting.
Eyre DW, Sheppard AE, Madder H, Moir I, Moroney R, Quan TP, Griffiths D, George S, Butcher L, Morgan M, Newnham R, Sunderland M, Clarke T, Foster D, Hoffman P, Borman AM, Johnson EM, Moore G, Brown CS, Walker AS, Peto TEA, Crook DW, Jeffery KJM. Eyre DW, et al. Among authors: sheppard ae. N Engl J Med. 2018 Oct 4;379(14):1322-1331. doi: 10.1056/NEJMoa1714373. N Engl J Med. 2018. PMID: 30281988 Free article.
Reconciling the Potentially Irreconcilable? Genotypic and Phenotypic Amoxicillin-Clavulanate Resistance in Escherichia coli.
Davies TJ, Stoesser N, Sheppard AE, Abuoun M, Fowler P, Swann J, Quan TP, Griffiths D, Vaughan A, Morgan M, Phan HTT, Jeffery KJ, Andersson M, Ellington MJ, Ekelund O, Woodford N, Mathers AJ, Bonomo RA, Crook DW, Peto TEA, Anjum MF, Walker AS. Davies TJ, et al. Among authors: sheppard ae. Antimicrob Agents Chemother. 2020 May 21;64(6):e02026-19. doi: 10.1128/AAC.02026-19. Print 2020 May 21. Antimicrob Agents Chemother. 2020. PMID: 32205351 Free PMC article.
Capsular Typing Method for Streptococcus agalactiae Using Whole-Genome Sequence Data.
Sheppard AE, Vaughan A, Jones N, Turner P, Turner C, Efstratiou A, Patel D; Modernising Medical Microbiology Informatics Group; Walker AS, Berkley JA, Crook DW, Seale AC. Sheppard AE, et al. J Clin Microbiol. 2016 May;54(5):1388-90. doi: 10.1128/JCM.03142-15. Epub 2016 Mar 9. J Clin Microbiol. 2016. PMID: 26962081 Free PMC article.
Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes.
De Maio N, Shaw LP, Hubbard A, George S, Sanderson ND, Swann J, Wick R, AbuOun M, Stubberfield E, Hoosdally SJ, Crook DW, Peto TEA, Sheppard AE, Bailey MJ, Read DS, Anjum MF, Walker AS, Stoesser N, On Behalf Of The Rehab Consortium. De Maio N, et al. Among authors: sheppard ae. Microb Genom. 2019 Sep;5(9):e000294. doi: 10.1099/mgen.0.000294. Epub 2019 Aug 30. Microb Genom. 2019. PMID: 31483244 Free PMC article.
Discordance between different bioinformatic methods for identifying resistance genes from short-read genomic data, with a focus on Escherichia coli.
Davies TJ, Swann J, Sheppard AE, Pickford H, Lipworth S, AbuOun M, Ellington MJ, Fowler PW, Hopkins S, Hopkins KL, Crook DW, Peto TEA, Anjum MF, Walker AS, Stoesser N. Davies TJ, et al. Among authors: sheppard ae. Microb Genom. 2023 Dec;9(12):001151. doi: 10.1099/mgen.0.001151. Microb Genom. 2023. PMID: 38100178 Free PMC article.
44 results