Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2013 1
2016 3
2017 2
2018 3
2019 3
2020 4
2021 7
2022 10
2023 13
2024 5

Text availability

Article attribute

Article type

Publication date

Search Results

48 results

Results by year

Filters applied: . Clear all
Page 1
Highly accurate protein structure prediction with AlphaFold.
Jumper J, Evans R, Pritzel A, Green T, Figurnov M, Ronneberger O, Tunyasuvunakool K, Bates R, Žídek A, Potapenko A, Bridgland A, Meyer C, Kohl SAA, Ballard AJ, Cowie A, Romera-Paredes B, Nikolov S, Jain R, Adler J, Back T, Petersen S, Reiman D, Clancy E, Zielinski M, Steinegger M, Pacholska M, Berghammer T, Bodenstein S, Silver D, Vinyals O, Senior AW, Kavukcuoglu K, Kohli P, Hassabis D. Jumper J, et al. Among authors: steinegger m. Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15. Nature. 2021. PMID: 34265844 Free PMC article.
Metagenome analysis using the Kraken software suite.
Lu J, Rincon N, Wood DE, Breitwieser FP, Pockrandt C, Langmead B, Salzberg SL, Steinegger M. Lu J, et al. Among authors: steinegger m. Nat Protoc. 2022 Dec;17(12):2815-2839. doi: 10.1038/s41596-022-00738-y. Epub 2022 Sep 28. Nat Protoc. 2022. PMID: 36171387 Free PMC article. Review.
ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning.
Elnaggar A, Heinzinger M, Dallago C, Rehawi G, Wang Y, Jones L, Gibbs T, Feher T, Angerer C, Steinegger M, Bhowmik D, Rost B. Elnaggar A, et al. Among authors: steinegger m. IEEE Trans Pattern Anal Mach Intell. 2022 Oct;44(10):7112-7127. doi: 10.1109/TPAMI.2021.3095381. Epub 2022 Sep 14. IEEE Trans Pattern Anal Mach Intell. 2022. PMID: 34232869
ColabFold: making protein folding accessible to all.
Mirdita M, Schütze K, Moriwaki Y, Heo L, Ovchinnikov S, Steinegger M. Mirdita M, et al. Among authors: steinegger m. Nat Methods. 2022 Jun;19(6):679-682. doi: 10.1038/s41592-022-01488-1. Epub 2022 May 30. Nat Methods. 2022. PMID: 35637307 Free PMC article.
Novel machine learning approaches revolutionize protein knowledge.
Bordin N, Dallago C, Heinzinger M, Kim S, Littmann M, Rauer C, Steinegger M, Rost B, Orengo C. Bordin N, et al. Among authors: steinegger m. Trends Biochem Sci. 2023 Apr;48(4):345-359. doi: 10.1016/j.tibs.2022.11.001. Epub 2022 Dec 9. Trends Biochem Sci. 2023. PMID: 36504138 Free PMC article. Review.
Clustering predicted structures at the scale of the known protein universe.
Barrio-Hernandez I, Yeo J, Jänes J, Mirdita M, Gilchrist CLM, Wein T, Varadi M, Velankar S, Beltrao P, Steinegger M. Barrio-Hernandez I, et al. Among authors: steinegger m. Nature. 2023 Oct;622(7983):637-645. doi: 10.1038/s41586-023-06510-w. Epub 2023 Sep 13. Nature. 2023. PMID: 37704730 Free PMC article.
Petascale Homology Search for Structure Prediction.
Lee S, Kim G, Karin EL, Mirdita M, Park S, Chikhi R, Babaian A, Kryshtafovych A, Steinegger M. Lee S, et al. Among authors: steinegger m. bioRxiv [Preprint]. 2023 Jul 11:2023.07.10.548308. doi: 10.1101/2023.07.10.548308. bioRxiv. 2023. PMID: 37503235 Free PMC article. Updated. Preprint.
Applying and improving AlphaFold at CASP14.
Jumper J, Evans R, Pritzel A, Green T, Figurnov M, Ronneberger O, Tunyasuvunakool K, Bates R, Žídek A, Potapenko A, Bridgland A, Meyer C, Kohl SAA, Ballard AJ, Cowie A, Romera-Paredes B, Nikolov S, Jain R, Adler J, Back T, Petersen S, Reiman D, Clancy E, Zielinski M, Steinegger M, Pacholska M, Berghammer T, Silver D, Vinyals O, Senior AW, Kavukcuoglu K, Kohli P, Hassabis D. Jumper J, et al. Among authors: steinegger m. Proteins. 2021 Dec;89(12):1711-1721. doi: 10.1002/prot.26257. Proteins. 2021. PMID: 34599769 Free PMC article.
Structure-guided isoform identification for the human transcriptome.
Sommer MJ, Cha S, Varabyou A, Rincon N, Park S, Minkin I, Pertea M, Steinegger M, Salzberg SL. Sommer MJ, et al. Among authors: steinegger m. Elife. 2022 Dec 15;11:e82556. doi: 10.7554/eLife.82556. Elife. 2022. PMID: 36519529 Free PMC article.
48 results