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1965 1
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Page 1
PlasmidHostFinder: Prediction of Plasmid Hosts Using Random Forest.
Aytan-Aktug D, Clausen PTLC, Szarvas J, Munk P, Otani S, Nguyen M, Davis JJ, Lund O, Aarestrup FM. Aytan-Aktug D, et al. Among authors: szarvas j. mSystems. 2022 Apr 26;7(2):e0118021. doi: 10.1128/msystems.01180-21. Epub 2022 Apr 6. mSystems. 2022. PMID: 35382558 Free PMC article.
Global Distribution of mcr Gene Variants in 214K Metagenomic Samples.
Martiny HM, Munk P, Brinch C, Szarvas J, Aarestrup FM, Petersen TN. Martiny HM, et al. Among authors: szarvas j. mSystems. 2022 Apr 26;7(2):e0010522. doi: 10.1128/msystems.00105-22. Epub 2022 Mar 28. mSystems. 2022. PMID: 35343801 Free PMC article.
Whole genomes from bacteria collected at diagnostic units around the world 2020.
Nag S, Larsen G, Szarvas J, Birkedahl LEK, Gulyás GM, Ciok WJ, Lagermann TM, Tafaj S, Bradbury S, Collignon P, Daley D, Dougnon V, Fabiyi K, Coulibaly B, Dembélé R, Nikiema G, Magloire N, Ouindgueta IJ, Hossain ZZ, Begum A, Donchev D, Diggle M, Turnbull L, Lévesque S, Berlinger L, Sogaard KK, Guevara PD, Valderrama CD, Maikanti P, Amlerova J, Drevinek P, Tkadlec J, Dilas M, Kaasch A, Westh HT, Bachtarzi MA, Amhis W, Salazar CES, Villacis J, Lúzon MAD, Palau DB, Duployez C, Paluche M, Asante-Sefa S, Moller M, Ip M, Mareković I, Pál-Sonnevend A, Cocuzza CE, Dambrauskiene A, Macanze A, Cossa A, Mandomando I, Nwajiobi-Princewill P, Okeke IN, Kehinde AO, Adebiyi I, Akintayo I, Popoola O, Onipede A, Blomfeldt A, Nyquist NE, Bocker K, Ussher J, Ali A, Ullah N, Khan H, Gustafson NW, Jarrar I, Al-Hamad A, Luvira V, Paveenkittiporn W, Baran I, Mwansa JCL, Sikakwa L, Yamba K, Hendriksen RS, Aarestrup FM. Nag S, et al. Among authors: szarvas j. Sci Data. 2023 Sep 16;10(1):628. doi: 10.1038/s41597-023-02502-7. Sci Data. 2023. PMID: 37717051 Free PMC article.
The first complete genome sequence of Staphylococcus aureus ST5477.
Leekitcharoenphon P, Otani S, Szarvas J, Mzee T, Kumburu H, Møller FD, Aarestrup FM. Leekitcharoenphon P, et al. Among authors: szarvas j. Microbiol Resour Announc. 2024 Feb 15;13(2):e0100423. doi: 10.1128/mra.01004-23. Epub 2024 Jan 5. Microbiol Resour Announc. 2024. PMID: 38179915 Free PMC article.
Danish Whole-Genome-Sequenced Candida albicans and Candida glabrata Samples Fit into Globally Prevalent Clades.
Szarvas J, Rebelo AR, Bortolaia V, Leekitcharoenphon P, Schrøder Hansen D, Nielsen HL, Nørskov-Lauritsen N, Kemp M, Røder BL, Frimodt-Møller N, Søndergaard TS, Coia JE, Østergaard C, Westh H, Aarestrup FM. Szarvas J, et al. J Fungi (Basel). 2021 Nov 12;7(11):962. doi: 10.3390/jof7110962. J Fungi (Basel). 2021. PMID: 34829249 Free PMC article.
Mobilisation and analyses of publicly available SARS-CoV-2 data for pandemic responses.
Rahman N, O'Cathail C, Zyoud A, Sokolov A, Oude Munnink B, Grüning B, Cummins C, Amid C, Nieuwenhuijse DF, Visontai D, Yuan DY, Gupta D, Prasad DK, Gulyás GM, Rinck G, McKinnon J, Rajan J, Knaggs J, Skiby JE, Stéger J, Szarvas J, Gueye K, Papp K, Hoek M, Kumar M, Ventouratou MA, Bouquieaux MC, Koliba M, Mansurova M, Haseeb M, Worp N, Harrison PW, Leinonen R, Thorne R, Selvakumar S, Hunt S, Venkataraman S, Jayathilaka S, Cezard T, Maier W, Waheed Z, Iqbal Z, Aarestrup FM, Csabai I, Koopmans M, Burdett T, Cochrane G. Rahman N, et al. Among authors: szarvas j. Microb Genom. 2024 Feb;10(2):001188. doi: 10.1099/mgen.0.001188. Microb Genom. 2024. PMID: 38358325 Free PMC article.
19 results