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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2013 4
2014 5
2015 5
2016 3
2017 2
2018 5
2019 3
2020 3
2021 4
2022 8
2023 6
2024 1

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44 results

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Page 1
Community-driven roadmap for integrated disease maps.
Ostaszewski M, Gebel S, Kuperstein I, Mazein A, Zinovyev A, Dogrusoz U, Hasenauer J, Fleming RMT, Le Novère N, Gawron P, Ligon T, Niarakis A, Nickerson D, Weindl D, Balling R, Barillot E, Auffray C, Schneider R. Ostaszewski M, et al. Among authors: weindl d. Brief Bioinform. 2019 Mar 25;20(2):659-670. doi: 10.1093/bib/bby024. Brief Bioinform. 2019. PMID: 29688273 Free PMC article. Review.
Non-targeted Tracer Fate Detection.
Weindl D, Wegner A, Hiller K. Weindl D, et al. Methods Enzymol. 2015;561:277-302. doi: 10.1016/bs.mie.2015.04.003. Epub 2015 Jun 14. Methods Enzymol. 2015. PMID: 26358908 Review.
How metabolites modulate metabolic flux.
Wegner A, Meiser J, Weindl D, Hiller K. Wegner A, et al. Among authors: weindl d. Curr Opin Biotechnol. 2015 Aug;34:16-22. doi: 10.1016/j.copbio.2014.11.008. Epub 2014 Nov 26. Curr Opin Biotechnol. 2015. PMID: 25461507 Free article. Review.
PESTO: Parameter EStimation TOolbox.
Stapor P, Weindl D, Ballnus B, Hug S, Loos C, Fiedler A, Krause S, Hroß S, Fröhlich F, Hasenauer J. Stapor P, et al. Among authors: weindl d. Bioinformatics. 2018 Feb 15;34(4):705-707. doi: 10.1093/bioinformatics/btx676. Bioinformatics. 2018. PMID: 29069312 Free PMC article.
MIA: non-targeted mass isotopolome analysis.
Weindl D, Wegner A, Hiller K. Weindl D, et al. Bioinformatics. 2016 Sep 15;32(18):2875-6. doi: 10.1093/bioinformatics/btw317. Epub 2016 Jun 6. Bioinformatics. 2016. PMID: 27273671 Free PMC article.
Complexity of dopamine metabolism.
Meiser J, Weindl D, Hiller K. Meiser J, et al. Among authors: weindl d. Cell Commun Signal. 2013 May 17;11(1):34. doi: 10.1186/1478-811X-11-34. Cell Commun Signal. 2013. PMID: 23683503 Free PMC article.
PEtab-Interoperable specification of parameter estimation problems in systems biology.
Schmiester L, Schälte Y, Bergmann FT, Camba T, Dudkin E, Egert J, Fröhlich F, Fuhrmann L, Hauber AL, Kemmer S, Lakrisenko P, Loos C, Merkt S, Müller W, Pathirana D, Raimúndez E, Refisch L, Rosenblatt M, Stapor PL, Städter P, Wang D, Wieland FG, Banga JR, Timmer J, Villaverde AF, Sahle S, Kreutz C, Hasenauer J, Weindl D. Schmiester L, et al. Among authors: weindl d. PLoS Comput Biol. 2021 Jan 26;17(1):e1008646. doi: 10.1371/journal.pcbi.1008646. eCollection 2021 Jan. PLoS Comput Biol. 2021. PMID: 33497393 Free PMC article.
pyPESTO: a modular and scalable tool for parameter estimation for dynamic models.
Schälte Y, Fröhlich F, Jost PJ, Vanhoefer J, Pathirana D, Stapor P, Lakrisenko P, Wang D, Raimúndez E, Merkt S, Schmiester L, Städter P, Grein S, Dudkin E, Doresic D, Weindl D, Hasenauer J. Schälte Y, et al. Among authors: weindl d. Bioinformatics. 2023 Nov 1;39(11):btad711. doi: 10.1093/bioinformatics/btad711. Bioinformatics. 2023. PMID: 37995297 Free PMC article.
BioSimulators: a central registry of simulation engines and services for recommending specific tools.
Shaikh B, Smith LP, Vasilescu D, Marupilla G, Wilson M, Agmon E, Agnew H, Andrews SS, Anwar A, Beber ME, Bergmann FT, Brooks D, Brusch L, Calzone L, Choi K, Cooper J, Detloff J, Drawert B, Dumontier M, Ermentrout GB, Faeder JR, Freiburger AP, Fröhlich F, Funahashi A, Garny A, Gennari JH, Gleeson P, Goelzer A, Haiman Z, Hasenauer J, Hellerstein JL, Hermjakob H, Hoops S, Ison JC, Jahn D, Jakubowski HV, Jordan R, Kalaš M, König M, Liebermeister W, Sheriff RSM, Mandal S, McDougal R, Medley JK, Mendes P, Müller R, Myers CJ, Naldi A, Nguyen TVN, Nickerson DP, Olivier BG, Patoliya D, Paulevé L, Petzold LR, Priya A, Rampadarath AK, Rohwer JM, Saglam AS, Singh D, Sinha A, Snoep J, Sorby H, Spangler R, Starruß J, Thomas PJ, van Niekerk D, Weindl D, Zhang F, Zhukova A, Goldberg AP, Schaff JC, Blinov ML, Sauro HM, Moraru II, Karr JR. Shaikh B, et al. Among authors: weindl d. Nucleic Acids Res. 2022 Jul 5;50(W1):W108-W114. doi: 10.1093/nar/gkac331. Nucleic Acids Res. 2022. PMID: 35524558 Free PMC article.
44 results