Zarrineh P[au] - Search Results

Year	Number of Results
2010	1
2011	1
2013	1
2014	2
2015	1
2017	3
2020	4
2021	1
2023	1
2024	0

1

A spatio-temporally constrained gene regulatory network directed by PBX1/2 acquires limb patterning specificity via HAND2.

Losa M, Barozzi I, Osterwalder M, Hermosilla-Aguayo V, Morabito A, Chacón BH, Zarrineh P, Girdziusaite A, Benazet JD, Zhu J, Mackem S, Capellini TD, Dickel D, Bobola N, Zuniga A, Visel A, Zeller R, Selleri L. Losa M, et al. Among authors: zarrineh p. Nat Commun. 2023 Jul 6;14(1):3993. doi: 10.1038/s41467-023-39443-z. Nat Commun. 2023. PMID: 37414772 Free PMC article.

2

COMODO: an adaptive coclustering strategy to identify conserved coexpression modules between organisms.

Zarrineh P, Fierro AC, Sánchez-Rodríguez A, De Moor B, Engelen K, Marchal K. Zarrineh P, et al. Nucleic Acids Res. 2011 Apr;39(7):e41. doi: 10.1093/nar/gkq1275. Epub 2010 Dec 10. Nucleic Acids Res. 2011. PMID: 21149270 Free PMC article.

3

Molecular Characterization of HOXA2 and HOXA3 Binding Properties.

Mallen J, Kalsan M, Zarrineh P, Bridoux L, Ahmad S, Bobola N. Mallen J, et al. Among authors: zarrineh p. J Dev Biol. 2021 Dec 3;9(4):55. doi: 10.3390/jdb9040055. J Dev Biol. 2021. PMID: 34940502 Free PMC article.

4

Uncovering tissue-specific binding features from differential deep learning.

Phuycharoen M, Zarrineh P, Bridoux L, Amin S, Losa M, Chen K, Bobola N, Rattray M. Phuycharoen M, et al. Among authors: zarrineh p. Nucleic Acids Res. 2020 Mar 18;48(5):e27. doi: 10.1093/nar/gkaa009. Nucleic Acids Res. 2020. PMID: 31974574 Free PMC article.

5

Dynamic changes in the epigenomic landscape regulate human organogenesis and link to developmental disorders.

Gerrard DT, Berry AA, Jennings RE, Birket MJ, Zarrineh P, Garstang MG, Withey SL, Short P, Jiménez-Gancedo S, Firbas PN, Donaldson I, Sharrocks AD, Hanley KP, Hurles ME, Gomez-Skarmeta JL, Bobola N, Hanley NA. Gerrard DT, et al. Among authors: zarrineh p. Nat Commun. 2020 Aug 6;11(1):3920. doi: 10.1038/s41467-020-17305-2. Nat Commun. 2020. PMID: 32764605 Free PMC article.

6

Analysis of chromatin organization and gene expression in T cells identifies functional genes for rheumatoid arthritis.

Yang J, McGovern A, Martin P, Duffus K, Ge X, Zarrineh P, Morris AP, Adamson A, Fraser P, Rattray M, Eyre S. Yang J, et al. Among authors: zarrineh p. Nat Commun. 2020 Sep 2;11(1):4402. doi: 10.1038/s41467-020-18180-7. Nat Commun. 2020. PMID: 32879318 Free PMC article.

7

HOX paralogs selectively convert binding of ubiquitous transcription factors into tissue-specific patterns of enhancer activation.

Bridoux L, Zarrineh P, Mallen J, Phuycharoen M, Latorre V, Ladam F, Losa M, Baker SM, Sagerstrom C, Mace KA, Rattray M, Bobola N. Bridoux L, et al. Among authors: zarrineh p. PLoS Genet. 2020 Dec 14;16(12):e1009162. doi: 10.1371/journal.pgen.1009162. eCollection 2020 Dec. PLoS Genet. 2020. PMID: 33315856 Free PMC article.

8

A tissue-specific, Gata6-driven transcriptional program instructs remodeling of the mature arterial tree.

Losa M, Latorre V, Andrabi M, Ladam F, Sagerström C, Novoa A, Zarrineh P, Bridoux L, Hanley NA, Mallo M, Bobola N. Losa M, et al. Among authors: zarrineh p. Elife. 2017 Sep 27;6:e31362. doi: 10.7554/eLife.31362. Elife. 2017. PMID: 28952437 Free PMC article.

9

Predicting brain network changes in Alzheimer's disease with link prediction algorithms.

Sulaimany S, Khansari M, Zarrineh P, Daianu M, Jahanshad N, Thompson PM, Masoudi-Nejad A. Sulaimany S, et al. Among authors: zarrineh p. Mol Biosyst. 2017 Mar 28;13(4):725-735. doi: 10.1039/c6mb00815a. Mol Biosyst. 2017. PMID: 28197591 Free PMC article.

10

Draft Genome Sequence of Pseudomonas fluorescens LMG 5329, a White Line-Inducing Principle-Producing Bioindicator for the Mushroom Pathogen Pseudomonas tolaasii.

Ghequire MG, Rokni-Zadeh H, Zarrineh P, De Mot R. Ghequire MG, et al. Among authors: zarrineh p. Genome Announc. 2013 Jul 25;1(4):e00383-13. doi: 10.1128/genomeA.00383-13. Genome Announc. 2013. PMID: 23887909 Free PMC article.

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