User profiles for A. J. Medlar

Alan Medlar

HIIT Research Fellow, University of Helsinki
Verified email at helsinki.fi
Cited by 2564

[HTML][HTML] The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

…, T Goldberg, C Zhao, L Holm, P Törönen, AJ Medlar… - Genome biology, 2019 - Springer
Background The Critical Assessment of Functional Annotation (CAFA) is an ongoing, global,
community-driven effort to evaluate and improve the computational annotation of protein …

Mutations in the autoregulatory domain of β‐tubulin 4a cause hereditary dystonia

…, K Fawcett, V Plagnol, KP Bhatia, AJ Medlar… - Annals of …, 2013 - Wiley Online Library
Dystonia type 4 (DYT4) was first described in a large family from Heacham in Norfolk with
an autosomal dominantly inherited whispering dysphonia, generalized dystonia, and a …

Genetic testing in renal disease

D Bockenhauer, AJ Medlar, E Ashton, R Kleta… - Pediatric …, 2012 - Springer
A revolution is happening in genetics! The decoding of the first genome in 2003 was a large
international collaborative effort that took about 13 years at a cost of around $2.7 billion. Now…

AAI-profiler: fast proteome-wide exploratory analysis reveals taxonomic identity, misclassification and contamination

AJ Medlar, P Törönen, L Holm - Nucleic acids research, 2018 - academic.oup.com
We present AAI-profiler, a web server for exploratory analysis and quality control in comparative
genomics. AAI-profiler summarizes proteome-wide sequence search results to identify …

Phospholipase A2 receptor (PLA2R1) sequence variants in idiopathic membranous nephropathy

…, H Debiec, HC Stanescu, AJ Medlar… - Journal of the …, 2013 - journals.lww.com
The M-type receptor for phospholipase A2 (PLA2R1) is the major target antigen in idiopathic
membranous nephropathy (iMN). Our recent genome-wide association study showed that …

[HTML][HTML] Nephrocalcinosis (enamel renal syndrome) caused by autosomal recessive FAM20A mutations

…, A Asselin, A Picard, A Coulomb, AJ Medlar… - Nephron …, 2013 - karger.com
Background/Aims: Calcium homeostasis requires regulated cellular and interstitial systems
interacting to modulate the activity and movement of this ion. Disruption of these systems in …

[PDF][PDF] Pannzer 2: Annotate a complete proteome in minutes

AJ Medlar, P Törönen, E Zosa, L Holm - Nucl. Acids Res, 2018 - biofunctionprediction.org
As high-throughput sequencing has become increasingly efficient, downstream analysis has
become the main bottleneck in genome sequencing projects. For example, a critical and …

Manycore Algorithms for Genetic Linkage Analysis

AJ Medlar - 2012 - discovery.ucl.ac.uk
… I, Alan John Medlar confirm that the work presented in this thesis is my own. Where information
has been derived from other sources, I confirm that this has been indicated in the thesis. …

[HTML][HTML] Risk HLA-DQA1 and PLA2R1 Alleles in Idiopathic Membranous Nephropathy

HC Stanescu, M Arcos-Burgos, A Medlar… - … England Journal of …, 2011 - Mass Medical Soc
Background Idiopathic membranous nephropathy is a major cause of the nephrotic syndrome
in adults, but its etiologic basis is not fully understood. We investigated the genetic basis of …

Autoinflammatory periodic fever, immunodeficiency, and thrombocytopenia (PFIT) caused by mutation in actin-regulatory gene WDR1

…, H Jones, E Omoyinmi, KC Gilmour, A Medlar… - Journal of Experimental …, 2017 - rupress.org
The importance of actin dynamics in the activation of the inflammasome is becoming increasingly
apparent. IL-1β, which is activated by the inflammasome, is known to be central to the …