User profiles for A. Sanchis-Juan

Alba Sanchis-Juan

Postdoctoral Fellow at Broad Institute of MIT and Harvard
Verified email at mgh.harvard.edu
Cited by 3174

Beyond the exome: what's next in diagnostic testing for Mendelian conditions

…, EC Délot, D Jain, A Sanchis-Juan… - The American Journal of …, 2023 - cell.com
Despite advances in clinical genetic testing, including the introduction of exome sequencing
(ES), more than 50% of individuals with a suspected Mendelian condition lack a precise …

[PDF][PDF] Comprehensive rare variant analysis via whole-genome sequencing to determine the molecular pathology of inherited retinal disease

…, G Arno, M Erwood, J Stephens, A Sanchis-Juan… - The American Journal of …, 2017 - cell.com
Inherited retinal disease is a common cause of visual impairment and represents a highly
heterogeneous group of conditions. Here, we present findings from a cohort of 722 individuals …

GATK-gCNV enables the discovery of rare copy number variants from exome sequencing data

…, KJ Karczewski, I Wong, RL Collins, A Sanchis-Juan… - Nature …, 2023 - nature.com
Copy number variants (CNVs) are major contributors to genetic diversity and disease. While
standardized methods, such as the genome analysis toolkit (GATK), exist for detecting short …

Whole-genome sequencing of patients with rare diseases in a national health system

…, D Greene, O Shamardina, HL Allen, A Sanchis-Juan… - Nature, 2020 - nature.com
Most patients with rare diseases do not receive a molecular diagnosis and the aetiological
variants and causative genes for more than half such disorders remain to be discovered 1 . …

THE ROLE OF SUNK COSTS IN THE DECISION TO INVEST IN R&D*

JA Manez, ME Rochina‐Barrachina… - The Journal of …, 2009 - Wiley Online Library
We present a dynamic empirical model of a firm's R&D decisions that is consistent with the
existence of sunk R&D costs, taking into account that these costs may differ between small …

[HTML][HTML] Whole genome sequencing reveals that genetic conditions are frequent in intensively ill children

CE French, I Delon, H Dolling, A Sanchis-Juan… - Intensive care …, 2019 - Springer
Purpose With growing evidence that rare single gene disorders present in the neonatal period,
there is a need for rapid, systematic, and comprehensive genomic diagnoses in ICUs to …

[HTML][HTML] Complex structural variants in Mendelian disorders: identification and breakpoint resolution using short-and long-read genome sequencing

A Sanchis-Juan, J Stephens, CE French, N Gleadall… - Genome medicine, 2018 - Springer
Background Studies have shown that complex structural variants (cxSVs) contribute to human
genomic variation and can cause Mendelian disease. We aimed to identify cxSVs relevant …

Babelomics 5.0: functional interpretation for new generations of genomic data

…, M Bleda, L Garcia-Alonso, A Sanchis-Juan… - Nucleic acids …, 2015 - academic.oup.com
Babelomics has been running for more than one decade offering a user-friendly interface
for the functional analysis of gene expression and genomic data. Here we present its fifth …

[PDF][PDF] De novo pathogenic variants in CACNA1E cause developmental and epileptic encephalopathy with contractures, macrocephaly, and dyskinesias

…, A Rotenberg, A Poduri, A Sanchis-Juan… - The American Journal of …, 2018 - cell.com
Developmental and epileptic encephalopathies (DEEs) are severe neurodevelopmental
disorders often beginning in infancy or early childhood that are characterized by intractable …

ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions

…, JJFA van Vugt, C French, A Sanchis-Juan… - …, 2019 - academic.oup.com
We describe a novel computational method for genotyping repeats using sequence graphs.
This method addresses the long-standing need to accurately genotype medically important …