User profiles for A. Shilatifard

Ali Shilatifard

Professor and Chairman of Biochemistry, Director of Simpson Querrey Institute for …
Verified email at northwestern.edu
Cited by 50490

Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression

A Shilatifard - Annu. Rev. Biochem., 2006 - annualreviews.org
It is more evident now than ever that nucleosomes can transmit epigenetic information from
one cell generation to the next. It has been demonstrated during the past decade that the …

The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis

A Shilatifard - Annual review of biochemistry, 2012 - annualreviews.org
The Saccharomyces cerevisiae Set1/COMPASS was the first histone H3 lysine 4 (H3K4)
methylase identified over 10 years ago. Since then, it has been demonstrated that Set1/…

The roles of Polycomb repressive complexes in mammalian development and cancer

A Piunti, A Shilatifard - Nature Reviews Molecular Cell Biology, 2021 - nature.com
More than 80 years ago, the first Polycomb-related phenotype was identified in Drosophila
melanogaster. Later, a group of diverse genes collectively called Polycomb group (PcG) …

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

…, G Butland, AM Altaf-Ul, S Kanaya, A Shilatifard… - Nature, 2006 - nature.com
Identification of protein–protein interactions often provides insight into protein function, and
many cellular processes are performed by stable protein complexes. We used tandem affinity …

[HTML][HTML] An operational definition of epigenetics

…, T Kouzarides, R Shiekhattar, A Shilatifard - Genes & …, 2009 - genesdev.cshlp.org
A recent meeting (December 2008) regarding chromatin-based epigenetics was hosted by
the Banbury Conference Center and Cold Spring Harbor Laboratory. The intent was to …

[HTML][HTML] Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia

…, Y Politanska, L Sichizya, M Kang, A Shilatifard… - Nature, 2021 - nature.com
Some patients infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
develop severe pneumonia and acute respiratory distress syndrome 1 (ARDS). Distinct …

Single-cell transcriptomic analysis of human lung provides insights into the pathobiology of pulmonary fibrosis

…, AV Yeldandi, SA Marshall, A Shilatifard… - American journal of …, 2019 - atsjournals.org
Rationale: The contributions of diverse cell populations in the human lung to pulmonary
fibrosis pathogenesis are poorly understood. Single-cell RNA sequencing can reveal changes …

Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II

…, A Emili, C Boone, A Shilatifard… - … and cellular biology, 2003 - Am Soc Microbiol
Set2 methylates Lys36 of histone H3. We show here that yeast Set2 copurifies with RNA
polymerase II (RNAPII). Chromatin immunoprecipitation analyses demonstrated that Set2 and …

[PDF][PDF] The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation

…, A Golshani, M Johnston, JF Greenblatt, A Shilatifard - Molecular cell, 2003 - cell.com
Methylation of histone proteins is one of their many modifications that affect chromatin structure
and regulate gene expression. Methylation of histone H3 on lysines 4 and 79, catalyzed …

Monocyte-derived alveolar macrophages drive lung fibrosis and persist in the lung over the life span

…, KM Ridge, N Bagheri, A Shilatifard… - Journal of Experimental …, 2017 - rupress.org
Little is known about the relative importance of monocyte and tissue-resident macrophages
in the development of lung fibrosis. We show that specific genetic deletion of monocyte-…