Genome sequencing technologies continue to develop with remarkable pace, yet analytical
approaches for reconstructing and classifying viral genomes from mixed samples remain …

Asthma development and exacerbation is linked to respiratory virus infections. There is limited
information regarding the presence of viruses during non-exacerbation/infection periods. …

Black women across the African diaspora experience more aggressive breast cancer with
higher mortality rates than white women of European ancestry. Although inter-ethnic germline …

Whole genome sequencing (WGS) allows exploration of the complete compendium of
oncogenic processes generating characteristic patterns of mutations. Mutational signatures …

In many situations it is desirable to compare dynamical systems based on their behavior.
Similarity of behavior often implies similarity of internal mechanisms or dependency on …

Asthma development and persistence is tightly linked to respiratory viruses. Viral presence
is usually interrogated with targeted approaches during periods of disease activity and/or …

Algorithms in bioinformatics use textual representations of genetic information, sequences
of the characters A, T, G and C represented computationally as strings or sub-strings. Signal …

Bacteriophages that lyse Salmonella enterica are potential tools to target and control
Salmonella infections. Investigating the host range of Salmonella phages is a key to understand …

Motivation: DNA sequencing instruments are enabling genomic analyses of unprecedented
scope and scale, widening the gap between our abilities to generate and interpret sequence …

Abstract Analysis of time series data constitutes an important activity in many scientific
disciplines. Over the last years there has been an increase in the collection of time series data in …