Ultrahigh-throughput functional profiling of microbiota communities

…, MV Malakhova, AE Samoilov… - Proceedings of the …, 2018 - National Acad Sciences
Microbiome spectra serve as critical clues to elucidate the evolutionary biology pathways,
potential pathologies, and even behavioral patterns of the host organisms. Furthermore, exotic …

[HTML][HTML] Case report: change of dominant strain during dual SARS-CoV-2 infection

AE Samoilov, VV Kaptelova, AY Bukharina… - BMC Infectious …, 2021 - Springer
Background The dual infection with SARS-CoV-2 is poorly described and is currently under
discussion. We present a study of two strains of SARS-CoV-2 detected in the same patient …

The rise and spread of the SARS-CoV-2 AY. 122 lineage in Russia

…, AS Speranskaya, AE Samoilov… - Virus …, 2022 - academic.oup.com
Delta has outcompeted most preexisting variants of SARS-CoV-2, becoming the globally
predominant lineage by mid-2021. Its subsequent evolution has led to the emergence of …

[HTML][HTML] Shifts in the Human Gut Microbiota Structure Caused by Quadruple Helicobacter pylori Eradication Therapy

EI Olekhnovich, AI Manolov, AE Samoilov… - Frontiers in …, 2019 - frontiersin.org
The human gut microbiome plays an important role both in health and disease. Use of
antibiotics can alter gut microbiota composition, which can lead to various deleterious events. …

[HTML][HTML] Gene Loss, Pseudogenization in Plastomes of Genus Allium (Amaryllidaceae), and Putative Selection for Adaptation to Environmental Conditions

…, MD Logacheva, EA Konorov, AE Samoilov… - Frontiers in …, 2021 - frontiersin.org
Amaryllidaceae is a large family with more than 1,600 species, belonging to 75 genera. The
largest genus—Allium—is vast, comprising about a thousand species. Allium species (as …

[HTML][HTML] Identification and Genetic Characterization of MERS-Related Coronavirus Isolated from Nathusius' Pipistrelle (Pipistrellus nathusii) near Zvenigorod (Moscow …

AS Speranskaya, IV Artiushin, AE Samoilov… - International Journal of …, 2023 - mdpi.com
Being diverse and widely distributed globally, bats are a known reservoir of a series of
emerging zoonotic viruses. We studied fecal viromes of twenty-six bats captured in 2015 in the …

[HTML][HTML] Integrated Jingmenvirus Polymerase Gene in Ixodes ricinus Genome

…, AG Litov, AV Valdokhina, VP Bulanenko, AE Samoilov… - Viruses, 2022 - mdpi.com
Members of the jingmenviruses group have been found in arthropods and mammals on all
continents except Australia and Antarctica. Two viruses of this group were isolated from …

[HTML][HTML] Data on gut metagenomes of the patients with Helicobacter pylori infection before and after the antibiotic therapy

OE Glushchenko, AE Samoilov, EI Olekhnovich… - Data in brief, 2017 - Elsevier
Antibiotic therapy can lead to the disruption of gut microbiota community with possible
negative outcomes for human health. One of the diseases for which the treatment scheme …

Isolation and characterization of Wad Medani virus obtained in the tuva Republic of Russia

…, AS Dolgova, MV Safonova, AE Samoilov… - Ticks and tick-borne …, 2021 - Elsevier
Wad Medani virus (WMV) belongs to the genus Orbivirus and is a poorly studied arbovirus
with unclear medical significance. Presently, a limited number of WMV strains are …

Change of dominant strain during dual SARS-CoV-2 infection

AE Samoilov, VV Kaptelova, AY Bukharina… - medRxiv, 2020 - medrxiv.org
Background The effect of SARS-CoV-2 mutations and viral load on the severity of COVID-19
is not well understood. The possibility of reinfection with SARS-CoV-2 has already been …