User profiles for Aaron M. Fleming
Aaron FlemingResearch Scientist, University of Utah Verified email at chem.utah.edu Cited by 5160 |
Oxidative DNA damage is epigenetic by regulating gene transcription via base excision repair
AM Fleming, Y Ding… - Proceedings of the …, 2017 - National Acad Sciences
Reactive oxygen species (ROS) have emerged as important cellular-signaling agents for
cellular survival. Herein, we demonstrate that ROS-mediated oxidation of DNA to yield 8-oxo-7,…
cellular survival. Herein, we demonstrate that ROS-mediated oxidation of DNA to yield 8-oxo-7,…
Transcriptome-wide profiling of multiple RNA modifications simultaneously at single-base resolution
…, A Yerra, TL Mosbruger, AM Fleming… - Proceedings of the …, 2019 - National Acad Sciences
The breadth and importance of RNA modifications are growing rapidly as modified
ribonucleotides can impact the sequence, structure, function, stability, and fate of RNAs and their …
ribonucleotides can impact the sequence, structure, function, stability, and fate of RNAs and their …
The NEIL glycosylases remove oxidized guanine lesions from telomeric and promoter quadruplex DNA structures
G-quadruplex is a four-stranded G-rich DNA structure that is highly susceptible to oxidation.
Despite the important roles that G-quadruplexes play in telomere biology and gene …
Despite the important roles that G-quadruplexes play in telomere biology and gene …
G-quadruplex folds of the human telomere sequence alter the site reactivity and reaction pathway of guanine oxidation compared to duplex DNA
AM Fleming, CJ Burrows - Chemical research in toxicology, 2013 - ACS Publications
Telomere shortening occurs during oxidative and inflammatory stress with guanine (G) as
the major site of damage. In this work, a comprehensive profile of the sites of oxidation and …
the major site of damage. In this work, a comprehensive profile of the sites of oxidation and …
Sequencing the mouse genome for the oxidatively modified base 8-oxo-7, 8-dihydroguanine by OG-Seq
Oxidative damage to the genome can yield the base 8-oxo-7,8-dihydroguanine (OG). In
vitro studies suggested OG would preferentially form in 5′-GG-3′ sequence contexts after …
vitro studies suggested OG would preferentially form in 5′-GG-3′ sequence contexts after …
8-Oxo-7, 8-dihydroguanine, friend and foe: Epigenetic-like regulator versus initiator of mutagenesis
AM Fleming, CJ Burrows - DNA repair, 2017 - Elsevier
A high flux of reactive oxygen species during oxidative stress results in oxidative modification
of cellular components including DNA. Oxidative DNA “damage” to the heterocyclic bases …
of cellular components including DNA. Oxidative DNA “damage” to the heterocyclic bases …
A role for the fifth G-track in G-quadruplex forming oncogene promoter sequences during oxidative stress: Do these “spare tires” have an evolved function?
AM Fleming, J Zhou, SS Wallace… - ACS central science, 2015 - ACS Publications
Uncontrolled inflammation or oxidative stress generates electron-deficient species that
oxidize the genome increasing its instability in cancer. The G-quadruplex (G4) sequences …
oxidize the genome increasing its instability in cancer. The G-quadruplex (G4) sequences …
Zika virus genomic RNA possesses conserved G-quadruplexes characteristic of the flaviviridae family
Zika virus has emerged as a global concern because neither a vaccine nor antiviral
compounds targeting it exist. A structure for the positive-sense RNA genome has not been …
compounds targeting it exist. A structure for the positive-sense RNA genome has not been …
[HTML][HTML] Neil3 and NEIL1 DNA glycosylases remove oxidative damages from quadruplex DNA and exhibit preferences for lesions in the telomeric sequence context
The telomeric DNA of vertebrates consists of d(TTAGGG) n tandem repeats, which can form
quadruplex DNA structures in vitro and likely in vivo. Despite the fact that the G-rich telomeric …
quadruplex DNA structures in vitro and likely in vivo. Despite the fact that the G-rich telomeric …
Interplay of guanine oxidation and G-quadruplex folding in gene promoters
AM Fleming, CJ Burrows - Journal of the American Chemical …, 2019 - ACS Publications
Living in an oxygen atmosphere demands an ability to thrive in the presence of reactive
oxygen species (ROS). Aerobic organisms have successfully found solutions to the oxidative …
oxygen species (ROS). Aerobic organisms have successfully found solutions to the oxidative …