[HTML][HTML] CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer
…, A Ramu, KM Campbell, GC Spies, AP Graubert… - Nature …, 2017 - nature.com
CIViC is an expert-crowdsourced knowledgebase for Clinical Interpretation of Variants in
Cancer describing the therapeutic, prognostic, diagnostic and predisposing relevance of …
Cancer describing the therapeutic, prognostic, diagnostic and predisposing relevance of …
pVACtools: a computational toolkit to identify and visualize cancer neoantigens
Identification of neoantigens is a critical step in predicting response to checkpoint blockade
therapy and design of personalized cancer vaccines. This is a cross-disciplinary challenge, …
therapy and design of personalized cancer vaccines. This is a cross-disciplinary challenge, …
CIViC: a knowledgebase for expert-crowdsourcing the clinical interpretation of variants in cancer
…, A Ramu, KM Campbell, GC Spies, AP Graubert… - bioRxiv, 2016 - biorxiv.org
CIViC is an expert crowdsourced knowledgebase for Clinical Interpretation of Variants in
Cancer ( www.civicdb.org ) describing the therapeutic, prognostic, and diagnostic relevance of …
Cancer ( www.civicdb.org ) describing the therapeutic, prognostic, and diagnostic relevance of …
RNA-SeQC 2: efficient RNA-seq quality control and quantification for large cohorts
Post-sequencing quality control is a crucial component of RNA sequencing (RNA-seq) data
generation and analysis, as sample quality can be affected by sample storage, extraction …
generation and analysis, as sample quality can be affected by sample storage, extraction …
[PDF][PDF] A quantitative proteome map of the human body
Determining protein levels in each tissue and how they compare with RNA levels is important
for understanding human biology and disease as well as regulatory processes that control …
for understanding human biology and disease as well as regulatory processes that control …
[PDF][PDF] Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease
Long non-coding RNA (lncRNA) genes have well-established and important impacts on
molecular and cellular functions. However, among the thousands of lncRNA genes, it is still a …
molecular and cellular functions. However, among the thousands of lncRNA genes, it is still a …
[HTML][HTML] Ultra-Deep Sequencing As a Predictive Tool for MDS Progression after Allogeneic Hematopoietic Cell Transplant
…, JF DiPersio, TJ Ley, K Trinkaus, TA Graubert… - Blood, 2017 - Elsevier
Background: Allogeneic hematopoietic cell transplantation (alloHCT) is the only curative
treatment for patients with myelodysplastic syndromes (MDS). Up to 40% of MDS patients will …
treatment for patients with myelodysplastic syndromes (MDS). Up to 40% of MDS patients will …
[HTML][HTML] Subclonal evolution characterizes MDS disease progression following allogeneic stem cell transplant
…, JF DiPersio, P Westervelt, TJJ Ley, TA Graubert… - Blood, 2017 - Elsevier
… 7 , Timothy James J Ley MD 8 , Timothy Aaron Graubert MD 9 , Matthew J. Walter MD 10 … ,
MDPhD,7 Timothy James J Ley, MD,8 Timothy Aaron Graubert, MD,9 Matthew J. Walter, MD10 …
MDPhD,7 Timothy James J Ley, MD,8 Timothy Aaron Graubert, MD,9 Matthew J. Walter, MD10 …
[PDF][PDF] The public repository of xenografts enables discovery and randomized phase II-like trials in mice
…, H Gao, JS Garcia, F Garnache-Ottou, TA Graubert… - Cancer cell, 2016 - cell.com
More than 90% of drugs with preclinical activity fail in human trials, largely due to insufficient
efficacy. We hypothesized that adequately powered trials of patient-derived xenografts (PDX…
efficacy. We hypothesized that adequately powered trials of patient-derived xenografts (PDX…
Cancer immunogenomics: computational neoantigen identification and vaccine design
The application of modern high-throughput genomics to the study of cancer genomes has
exploded in the past few years, yielding unanticipated insights into the myriad and complex …
exploded in the past few years, yielding unanticipated insights into the myriad and complex …