[HTML][HTML] Widespread natural variation of DNA methylation within angiosperms
Background DNA methylation is an important feature of plant epigenomes, involved in the
formation of heterochromatin and affecting gene expression. Extensive variation of DNA …
formation of heterochromatin and affecting gene expression. Extensive variation of DNA …
Gene body DNA methylation in plants
AJ Bewick, RJ Schmitz - Current opinion in plant biology, 2017 - Elsevier
… Author links open overlay panel Adam J Bewick , Robert J Schmitz … In the model proposed
by Bewick et al. [17 •• ], (a) rare events where IBM1 fails to remove H3K9me2 leads to (b) …
by Bewick et al. [17 •• ], (a) rare events where IBM1 fails to remove H3K9me2 leads to (b) …
Evolution of DNA methylation across insects
DNA methylation contributes to gene and transcriptional regulation in eukaryotes, and
therefore has been hypothesized to facilitate the evolution of plastic traits such as sociality in …
therefore has been hypothesized to facilitate the evolution of plastic traits such as sociality in …
Widespread adenine N6-methylation of active genes in fungi
…, RO Dannebaum, RC Kuo, KB Louie, AJ Bewick… - Nature …, 2017 - nature.com
N6-methyldeoxyadenine (6mA) is a noncanonical DNA base modification present at low levels
in plant and animal genomes 1 , 2 , 3 , 4 , but its prevalence and association with genome …
in plant and animal genomes 1 , 2 , 3 , 4 , but its prevalence and association with genome …
On the origin and evolutionary consequences of gene body DNA methylation
AJ Bewick, L Ji, CE Niederhuth… - Proceedings of the …, 2016 - National Acad Sciences
In plants, CG DNA methylation is prevalent in the transcribed regions of many constitutively
expressed genes (gene body methylation; gbM), but the origin and function of gbM remain …
expressed genes (gene body methylation; gbM), but the origin and function of gbM remain …
Subgenome dominance in an interspecific hybrid, synthetic allopolyploid, and a 140-year-old naturally established neo-allopolyploid monkeyflower
…, AM Cooley, M Vallejo-Marin, Y Yuan, AJ Bewick… - The Plant …, 2017 - academic.oup.com
Recent studies have shown that one of the parental subgenomes in ancient polyploids is
generally more dominant, having retained more genes and being more highly expressed, a …
generally more dominant, having retained more genes and being more highly expressed, a …
[HTML][HTML] The evolution of CHROMOMETHYLASES and gene body DNA methylation in plants
AJ Bewick, CE Niederhuth, L Ji, NA Rohr, PT Griffin… - Genome biology, 2017 - Springer
Background The evolution of gene body methylation (gbM), its origins, and its functional
consequences are poorly understood. By pairing the largest collection of transcriptomes (>1000…
consequences are poorly understood. By pairing the largest collection of transcriptomes (>1000…
Diversity of cytosine methylation across the fungal tree of life
AJ Bewick, BT Hofmeister, RA Powers… - Nature ecology & …, 2019 - nature.com
The generation of thousands of fungal genomes is leading to a better understanding of genes
and genomic organization within the kingdom. However, the epigenome, which includes …
and genomic organization within the kingdom. However, the epigenome, which includes …
Firefly genomes illuminate parallel origins of bioluminescence in beetles
10.7554/eLife.36495.001 Fireflies and their luminous courtships have inspired centuries of
scientific study. Today firefly luciferase is widely used in biotechnology, but the evolutionary …
scientific study. Today firefly luciferase is widely used in biotechnology, but the evolutionary …
EVOLUTION OF THE CLOSELY RELATED, SEX‐RELATED GENES DM‐W AND DMRT1 IN AFRICAN CLAWED FROGS (XENOPUS)
AJ Bewick, DW Anderson, BJ Evans - Evolution, 2011 - academic.oup.com
DM‐W is a dominant, female‐specific, regulator of sex determination in the African clawed
frog Xenopus laevis. This gene is derived from partial duplication of DMRT1, a male‐related …
frog Xenopus laevis. This gene is derived from partial duplication of DMRT1, a male‐related …