User profiles for Aine Fairbrother-Browne
Aine Fairbrother-BrownePost-doctoral research fellow, University College London Verified email at ucl.ac.uk Cited by 31 |
IntroVerse: a comprehensive database of introns across human tissues
…, Z Chen, A Fairbrother-Browne… - Nucleic Acids …, 2023 - academic.oup.com
Dysregulation of RNA splicing contributes to both rare and complex diseases. RNA-sequencing
data from human tissues has shown that this process can be inaccurate, resulting in the …
data from human tissues has shown that this process can be inaccurate, resulting in the …
[HTML][HTML] Mitochondrial-nuclear cross-talk in the human brain is modulated by cell type and perturbed in neurodegenerative disease
A Fairbrother-Browne, AT Ali, RH Reynolds… - Communications …, 2021 - nature.com
Mitochondrial dysfunction contributes to the pathogenesis of many neurodegenerative
diseases. The mitochondrial genome encodes core respiratory chain proteins, but the vast …
diseases. The mitochondrial genome encodes core respiratory chain proteins, but the vast …
[HTML][HTML] Human-lineage-specific genomic elements are associated with neurodegenerative disease and APOE transcript usage
…, S García-Ruiz, K D'Sa, A Fairbrother-Browne… - Nature …, 2021 - nature.com
Abstract Knowledge of genomic features specific to the human lineage may provide insights
into brain-related diseases. We leverage high-depth whole genome sequencing data to …
into brain-related diseases. We leverage high-depth whole genome sequencing data to …
Functional genomics provide key insights to improve the diagnostic yield of hereditary ataxia
…, JW Brenton, S García-Ruiz, A Fairbrother-Browne… - Brain, 2023 - academic.oup.com
Improvements in functional genomic annotation have led to a critical mass of neurogenetic
discoveries. This is exemplified in hereditary ataxia, a heterogeneous group of disorders …
discoveries. This is exemplified in hereditary ataxia, a heterogeneous group of disorders …
Comparison of multiple whole-genome and Spike-only sequencing protocols for estimating variant frequencies via wastewater-based epidemiology
Sequencing of SARS-CoV-2 in wastewater provides a key opportunity to monitor the prevalence
of variants spatiotemporally, potentially facilitating their detection simultaneously with, …
of variants spatiotemporally, potentially facilitating their detection simultaneously with, …
[HTML][HTML] ensemblQueryR: fast, flexible and high-throughput querying of Ensembl LD API endpoints in R
A Fairbrother-Browne, S García-Ruiz, RH Reynolds… - GigaByte, 2023 - ncbi.nlm.nih.gov
We present ensemblQueryR, an R package for querying Ensembl linkage disequilibrium (LD)
endpoints. This package is flexible, fast and user-friendly, and optimised for high-…
endpoints. This package is flexible, fast and user-friendly, and optimised for high-…
[HTML][HTML] aws-s3-integrity-check: an open-source bash tool to verify the integrity of a dataset stored on Amazon S3
Amazon Simple Storage Service (Amazon S3) is a widely used platform for storing large
biomedical datasets. Unintended data alterations can occur during data writing and transmission…
biomedical datasets. Unintended data alterations can occur during data writing and transmission…
Human-lineage-specific genomic elements: relevance to neurodegenerative disease and APOE transcript usage
…, SG Ruiz, K D'Sa, A Fairbrother-Browne… - bioRxiv, 2020 - biorxiv.org
ABSTRACT Knowledge of genomic features specific to the human lineage may provide insights
into brain-related diseases. We leverage high-depth whole genome sequencing data to …
into brain-related diseases. We leverage high-depth whole genome sequencing data to …
Human brain mitochondrial-nuclear cross-talk is cell-type specific and is perturbed by neurodegeneration
A Fairbrother-Browne, AT Ali, RH Reynolds… - bioRxiv, 2021 - biorxiv.org
Mitochondrial dysfunction contributes to the pathogenesis of many neurodegenerative diseases
as mitochondria are essential to neuronal function. The mitochondrial genome encodes …
as mitochondria are essential to neuronal function. The mitochondrial genome encodes …
The role of mitochondrial-nuclear co-ordination in neurodegenerative disease
ÁS Fairbrother-Browne - 2023 - discovery.ucl.ac.uk
Neurodegenerative diseases (NDs) are progressive neurological conditions that affect
millions of people worldwide and yet there are few treatments that can prevent or slow …
millions of people worldwide and yet there are few treatments that can prevent or slow …