An integrated physical and genetic map of the rice genome

…, F Regad, T Mohapatra, NK Singh, AK Tyagi… - The Plant …, 2002 - academic.oup.com
Rice was chosen as a model organism for genome sequencing because of its economic
importance, small genome size, and syntenic relationship with other cereal species. We have …

Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR

M Jain, A Nijhawan, AK Tyagi, JP Khurana - Biochemical and biophysical …, 2006 - Elsevier
For accurate and reliable gene expression results, normalization of real-time PCR data is
required against a control gene, which displays highly uniform expression in living organisms …

Overexpression of a zinc-finger protein gene from rice confers tolerance to cold, dehydration, and salt stress in transgenic tobacco

…, S Vij, AK Tyagi - Proceedings of the …, 2004 - National Acad Sciences
Stress perception and signal transduction leading to tolerance involve a complex interplay
of different gene products. We describe here the isolation and characterization of an …

De Novo Assembly of Chickpea Transcriptome Using Short Reads for Gene Discovery and Marker Identification

R Garg, RK Patel, AK Tyagi, M Jain - DNA research, 2011 - academic.oup.com
Chickpea ranks third among the food legume crops production in the world. However, the
genomic resources available for chickpea are still very limited. In the present study, the …

[HTML][HTML] OsJAZ11 regulates phosphate starvation responses in rice

…, L Verma, A Prusty, AP Singh, MJ Bennett, AK Tyagi… - Planta, 2021 - Springer
Main conclusion OsJAZ11 regulates phosphate homeostasis by suppressing jasmonic acid
signaling and biosynthesis in rice roots. Abstract Jasmonic Acid (JA) is a key plant signaling …

F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and …

…, S Ray, P Sharma, S Kapoor, AK Tyagi… - Plant …, 2007 - academic.oup.com
F-box proteins constitute a large family in eukaryotes and are characterized by a conserved
F-box motif (approximately 40 amino acids). As components of the Skp1p-cullin-F-box …

[HTML][HTML] Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice

A Nijhawan, M Jain, AK Tyagi, JP Khurana - Plant physiology, 2008 - ncbi.nlm.nih.gov
The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators
present exclusively in eukaryotes. The bZIP proteins characteristically harbor a bZIP domain …

[HTML][HTML] MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress

…, P Agarwal, S Ray, AK Singh, VP Singh, AK Tyagi… - BMC genomics, 2007 - Springer
Background MADS-box transcription factors, besides being involved in floral organ
specification, have also been implicated in several aspects of plant growth and development. In …

A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.)

…, P Sharma, G Yadav, S Bhatia, AK Tyagi… - The Plant …, 2013 - Wiley Online Library
Cicer arietinum L. (chickpea) is the third most important food legume crop. We have generated
the draft sequence of a desi‐type chickpea genome using next‐generation sequencing …

Advances in cereal genomics and applications in crop breeding

RK Varshney, DA Hoisington, AK Tyagi - Trends in biotechnology, 2006 - cell.com
Recent advances in cereal genomics have made it possible to analyse the architecture of
cereal genomes and their expressed components, leading to an increase in our knowledge of …