User profiles for Aleksandra Klimas

Aleksandra Klimas

Carnegie Mellon University
Verified email at andrew.cmu.edu
Cited by 888

[HTML][HTML] Magnify is a universal molecular anchoring strategy for expansion microscopy

A Klimas, BR Gallagher, P Wijesekara, S Fekir… - Nature …, 2023 - nature.com
Expansion microscopy enables nanoimaging with conventional microscopes by physically
and isotropically magnifying preserved biological specimens embedded in a crosslinked …

[HTML][HTML] Computational optogenetics: empirically-derived voltage-and light-sensitive channelrhodopsin-2 model

JC Williams, J Xu, Z Lu, A Klimas, X Chen… - PLoS computational …, 2013 - journals.plos.org
Channelrhodospin-2 (ChR2), a light-sensitive ion channel, and its variants have emerged as
new excitatory optogenetic tools not only in neuroscience, but also in other areas, including …

[HTML][HTML] OptoDyCE as an automated system for high-throughput all-optical dynamic cardiac electrophysiology

A Klimas, CM Ambrosi, J Yu, JC Williams… - Nature …, 2016 - nature.com
The improvement of preclinical cardiotoxicity testing, discovery of new ion-channel-targeted
drugs, and phenotyping and use of stem cell-derived cardiomyocytes and other biologics all …

Optical control of excitation waves in cardiac tissue

RAB Burton, A Klimas, CM Ambrosi, J Tomek… - Nature …, 2015 - nature.com
In nature, macroscopic excitation waves 1 , 2 are found in a diverse range of settings
including chemical reactions, metal rust, yeast, amoeba and the heart and brain. In the case of …

Cardiac applications of optogenetics

CM Ambrosi, A Klimas, J Yu, E Entcheva - Progress in biophysics and …, 2014 - Elsevier
In complex multicellular systems, such as the brain or the heart, the ability to selectively
perturb and observe the response of individual components at the cellular level and with …

Super‐resolution vibrational imaging using expansion stimulated Raman scattering microscopy

L Shi, A Klimas, B Gallagher, Z Cheng, F Fu… - Advanced …, 2022 - Wiley Online Library
Stimulated Raman scattering (SRS) microscopy is an emerging technology that provides
high chemical specificity for endogenous biomolecules and can circumvent common …

[PDF][PDF] All-optical electrophysiology refines populations of in silico human iPSC-CMs for drug evaluation

M Paci, E Passini, A Klimas, S Severi, J Hyttinen… - Biophysical journal, 2020 - cell.com
High-throughput in vitro drug assays have been impacted by recent advances in human
induced pluripotent stem cell-derived cardiomyocyte (hiPSC-CM) technology and by contact-…

[HTML][HTML] Multimodal on-axis platform for all-optical electrophysiology with near-infrared probes in human stem-cell-derived cardiomyocytes

A Klimas, G Ortiz, SC Boggess, EW Miller… - Progress in biophysics …, 2020 - Elsevier
Combined optogenetic stimulation and optical imaging permit scalable, contact-free high-throughput
probing of cellular electrophysiology and optimization of stem-cell derived excitable …

MicroMagnify: A Multiplexed Expansion Microscopy Method for Pathogens and Infected Tissues

Z Cheng, C Stefani, T Skillman, A Klimas… - Advanced …, 2023 - Wiley Online Library
Super‐resolution optical imaging tools are crucial in microbiology to understand the complex
structures and behavior of microorganisms such as bacteria, fungi, and viruses. However, …

Toward microendoscopy-inspired cardiac optogenetics in vivo: technical overview and perspective

A Klimas, E Entcheva - Journal of biomedical optics, 2014 - spiedigitallibrary.org
The ability to perform precise, spatially localized actuation and measurements of electrical
activity in the heart is crucial in understanding cardiac electrophysiology and devising new …