User profiles for Aleksandre Japaridze

Aleksandre Japaridze

SoundCell
Verified email at tudelft.nl
Cited by 551

[PDF][PDF] CENP-B-mediated DNA loops regulate activity and stability of human centromeres

F Chardon, A Japaridze, H Witt, L Velikovsky… - Molecular cell, 2022 - cell.com
Chromosome inheritance depends on centromeres, epigenetically specified regions of
chromosomes. While conventional human centromeres are known to be built of long tandem …

Probing nanomotion of single bacteria with graphene drums

IE Rosłoń, A Japaridze, PG Steeneken… - Nature …, 2022 - nature.com
Motion is a key characteristic of every form of life 1 . Even at the microscale, it has been reported
that colonies of bacteria can generate nanomotion on mechanical cantilevers 2 , but the …

[HTML][HTML] Direct observation of independently moving replisomes in Escherichia coli

A Japaridze, C Gogou, JWJ Kerssemakers… - Nature …, 2020 - nature.com
The replication and transfer of genomic material from a cell to its progeny are vital processes
in all living systems. Here we visualize the process of chromosome replication in widened E…

[HTML][HTML] Direct imaging of the circular chromosome in a live bacterium

F Wu, A Japaridze, X Zheng, J Wiktor… - Nature …, 2019 - nature.com
Although the physical properties of chromosomes, including their morphology, mechanics,
and dynamics are crucial for their biological function, many basic questions remain …

[HTML][HTML] Mechanisms for chromosome segregation in bacteria

C Gogou, A Japaridze, C Dekker - Frontiers in Microbiology, 2021 - frontiersin.org
The process of DNA segregation, the redistribution of newly replicated genomic material to
daughter cells, is a crucial step in the life cycle of all living systems. Here, we review DNA …

Structure of EspB, a secreted substrate of the ESX-1 secretion system of Mycobacterium tuberculosis

…, J Piton, JM Wagner, S Boy-Röttger, A Japaridze… - Journal of structural …, 2015 - Elsevier
Mycobacterium tuberculosis secretes multiple virulence factors during infection via the
general Sec and Tat pathways, and via specialized ESX secretion systems, also referred to as …

[HTML][HTML] MukBEF-dependent chromosomal organization in widened Escherichia coli

A Japaridze, R van Wee, C Gogou… - Frontiers in …, 2023 - frontiersin.org
The bacterial chromosome is spatially organized through protein-mediated compaction,
supercoiling, and cell-boundary confinement. Structural Maintenance of Chromosomes (SMC) …

Toward an effective control of DNA's submolecular conformation on a surface

A Japaridze, D Vobornik, E Lipiec, A Cerreta… - …, 2016 - ACS Publications
DNA adopts different conformations based on its environment. We reveal conditions that
either preserve the DNA’s physiological B-conformation, even upon its placement in UHV, or …

Hyperplectonemes: a higher order compact and dynamic DNA self-organization

A Japaridze, G Muskhelishvili, F Benedetti… - Nano …, 2017 - ACS Publications
Bacterial chromosome has a compact structure that dynamically changes its shape in
response to bacterial growth rate and growth phase. Determining how chromatin remains …

[PDF][PDF] DNA sequence-directed cooperation between nucleoid-associated proteins

A Japaridze, W Yang, C Dekker, W Nasser… - Iscience, 2021 - cell.com
Nucleoid-associated proteins (NAPs) are a class of highly abundant DNA-binding proteins
in bacteria and archaea. While both the composition and relative abundance of the NAPs …