User profiles for Alexandros Armaos
Alexandros ArmaosIstituto Italiano di Tecnologia Verified email at tartaglialab.com Cited by 1082 |
[HTML][HTML] RNA structure drives interaction with proteins
N Sanchez de Groot, A Armaos… - Nature …, 2019 - nature.com
The combination of high-throughput sequencing and in vivo crosslinking approaches leads
to the progressive uncovering of the complex interdependence between cellular …
to the progressive uncovering of the complex interdependence between cellular …
Structural analysis of SARS-CoV-2 genome and predictions of the human interactome
Specific elements of viral genomes regulate interactions within host cells. Here, we calculated
the secondary structure content of >2000 coronaviruses and computed >100 000 human …
the secondary structure content of >2000 coronaviruses and computed >100 000 human …
Quantitative predictions of protein interactions with long noncoding RNAs
To the Editor: Long noncoding RNAs (lncRNAs, which comprise 68% of the human transcriptome
with average length of 1,000 nt) interact with various RNA-binding proteins (RBPs) to …
with average length of 1,000 nt) interact with various RNA-binding proteins (RBPs) to …
Phase separation drives X-chromosome inactivation: a hypothesis
The long non-coding RNA Xist induces heterochromatinization of the X chromosome by
recruiting repressive protein complexes to chromatin. Here we gather evidence, from the …
recruiting repressive protein complexes to chromatin. Here we gather evidence, from the …
[HTML][HTML] ORC1 binds to cis-transcribed RNAs for efficient activation of replication origins
Cells must coordinate the activation of thousands of replication origins dispersed throughout
their genome. Active transcription is known to favor the formation of mammalian origins, …
their genome. Active transcription is known to favor the formation of mammalian origins, …
SAMMSON fosters cancer cell fitness by concertedly enhancing mitochondrial and cytosolic translation
Synchronization of mitochondrial and cytoplasmic translation rates is critical for the
maintenance of cellular fitness, with cancer cells being especially vulnerable to translational …
maintenance of cellular fitness, with cancer cells being especially vulnerable to translational …
catRAPID omics v2.0: going deeper and wider in the prediction of protein–RNA interactions
Prediction of protein–RNA interactions is important to understand post-transcriptional events
taking place in the cell. Here we introduce catRAPID omics v2.0, an update of our web …
taking place in the cell. Here we introduce catRAPID omics v2.0, an update of our web …
[HTML][HTML] LINE-1 regulates cortical development by acting as long non-coding RNAs
Long Interspersed Nuclear Elements-1s (L1s) are transposable elements that constitute
most of the genome’s transcriptional output yet have still largely unknown functions. Here we …
most of the genome’s transcriptional output yet have still largely unknown functions. Here we …
RNAct: Protein–RNA interaction predictions for model organisms with supporting experimental data
Protein–RNA interactions are implicated in a number of physiological roles as well as
diseases, with molecular mechanisms ranging from defects in RNA splicing, localization and …
diseases, with molecular mechanisms ranging from defects in RNA splicing, localization and …
RNA-binding and prion domains: the Yin and Yang of phase separation
NL Gotor, A Armaos, G Calloni… - Nucleic acids …, 2020 - academic.oup.com
Proteins and RNAs assemble in membrane-less organelles that organize intracellular spaces
and regulate biochemical reactions. The ability of proteins and RNAs to form condensates …
and regulate biochemical reactions. The ability of proteins and RNAs to form condensates …