Distinct transcription profiles of primary and secondary glioblastoma subgroups

…, WA Freije, A Day, Z Chen, B Merriman, A Perlina… - Cancer research, 2006 - AACR
Glioblastomas are invasive and aggressive tumors of the brain, generally considered to arise
from glial cells. A subset of these cancers develops from lower-grade gliomas and can thus …

Integrated pathway analysis of rat urine metabolic profiles and kidney transcriptomic profiles to elucidate the systems toxicology of model nephrotoxicants

EY Xu, A Perlina, H Vu, SP Troth… - Chemical research in …, 2008 - ACS Publications
In this study, approximately 40 endogenous metabolites were identified and quantified by 1
H NMR in urine samples from male rats dosed with two proximal tubule toxicants, cisplatin …

[PDF][PDF] Downregulation of the ubiquitin ligase RNF125 underlies resistance of melanoma cells to BRAF inhibitors via JAK1 deregulation

…, C Krepler, L Brill, Y Samuels, NK Hayward, A Perlina… - Cell reports, 2015 - cell.com
Despite the remarkable clinical response of melanoma harboring BRAF mutations to BRAF
inhibitors (BRAFi), most tumors become resistant. Here, we identified the downregulation of …

[HTML][HTML] The salivary metatranscriptome as an accurate diagnostic indicator of oral cancer

…, PJ Torres, S Gline, M Parks, L Kenny, A Perlina… - NPJ genomic …, 2021 - nature.com
Despite advances in cancer treatment, the 5-year mortality rate for oral cancers (OC) is 40%,
mainly due to the lack of early diagnostics. To advance early diagnostics for high-risk and …

The transcription factor ATF2 promotes melanoma metastasis by suppressing protein fucosylation

E Lau, Y Feng, G Claps, MN Fukuda, A Perlina… - Science …, 2015 - science.org
Melanoma is one of the most lethal skin cancers worldwide, primarily because of its propensity
to metastasize. Thus, the elucidation of mechanisms that govern metastatic propensity is …

[HTML][HTML] A robust metatranscriptomic technology for population-scale studies of diet, gut microbiome, and human health

…, M Genkin, G Banavar, A Perlina… - International Journal of …, 2019 - hindawi.com
A functional readout of the gut microbiome is necessary to enable precise control of the gut
microbiome’s functions, which support human health and prevent or minimize a wide range …

[HTML][HTML] Gut microbiome activity contributes to prediction of individual variation in glycemic response in adults

…, M Genkin, H Lindau, A Sjue, I Slavov, A Perlina… - Diabetes Therapy, 2022 - Springer
Limiting postprandial glycemic response (PPGR) is an important intervention in reducing the
risk of chronic metabolic diseases and has been shown to impart significant health benefits …

A clinically validated human capillary blood transcriptome test for global systems biology studies

…, N Shen, S Krishnan, A Hatch, H Tily, A Perlina… - …, 2020 - Future Science
To prevent and treat chronic diseases, including cancer, a global application of systems
biology is needed. We report here a whole blood transcriptome test that needs only 50 μl of …

A systems biology approach reveals converging molecular mechanisms that link different POPs to common metabolic diseases

P Ruiz, A Perlina, M Mumtaz… - Environmental health …, 2016 - ehp.niehs.nih.gov
Background: A number of epidemiological studies have identified statistical associations
between persistent organic pollutants (POPs) and metabolic diseases, but testable hypotheses …

Gut microbiome activity contributes to individual variation in glycemic response in adults

H Tily, A Perlina, E Patridge, S Gline, M Genkin… - Biorxiv, 2019 - biorxiv.org
Limiting post-meal glycemic response is an important factor in reducing the risk of chronic
metabolic diseases, and contributes to significant health benefits in people with elevated …