Field-deployable viral diagnostics using CRISPR-Cas13
Mitigating global infectious disease requires diagnostic tools that are sensitive, specific, and
rapidly field deployable. In this study, we demonstrate that the Cas13-based SHERLOCK (…
rapidly field deployable. In this study, we demonstrate that the Cas13-based SHERLOCK (…
[HTML][HTML] An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar
How viruses evolve within hosts can dictate infection outcomes; however, reconstructing
this process is challenging. We evaluate our multiplexed amplicon approach, PrimalSeq, to …
this process is challenging. We evaluate our multiplexed amplicon approach, PrimalSeq, to …
Zika virus evolution and spread in the Americas
…, E Delatorre, YR Vieira, LM Paul, AL Tan… - Nature, 2017 - nature.com
Although the recent Zika virus (ZIKV) epidemic in the Americas and its link to birth defects
have attracted a great deal of attention 1 , 2 , much remains unknown about ZIKV disease …
have attracted a great deal of attention 1 , 2 , much remains unknown about ZIKV disease …
Genomic epidemiology reveals multiple introductions of Zika virus into the United States
Zika virus (ZIKV) is causing an unprecedented epidemic linked to severe congenital abnormalities
1 , 2 . In July 2016, mosquito-borne ZIKV transmission was reported in the continental …
1 , 2 . In July 2016, mosquito-borne ZIKV transmission was reported in the continental …
Dengue virus antibodies enhance Zika virus infection
LM Paul, ER Carlin, MM Jenkins, AL Tan… - Clinical & …, 2016 - Wiley Online Library
For decades, human infections with Zika virus (ZIKV), a mosquito‐transmitted flavivirus,
were sporadic, associated with mild disease, and went underreported since symptoms were …
were sporadic, associated with mild disease, and went underreported since symptoms were …
[HTML][HTML] Capturing sequence diversity in metagenomes with comprehensive and scalable probe design
…, G Barbosa-Lima, YR Vieira, LM Paul, AL Tan… - Nature …, 2019 - nature.com
Metagenomic sequencing has the potential to transform microbial detection and
characterization, but new tools are needed to improve its sensitivity. Here we present CATCH, a …
characterization, but new tools are needed to improve its sensitivity. Here we present CATCH, a …
[PDF][PDF] Travel surveillance and genomics uncover a hidden Zika outbreak during the waning epidemic
…, S Saraf, K Gangavarapu, A Watts, AL Tan… - Cell, 2019 - cell.com
The Zika epidemic in the Americas has challenged surveillance and control. As the
epidemic appears to be waning, it is unclear whether transmission is still ongoing, which is …
epidemic appears to be waning, it is unclear whether transmission is still ongoing, which is …
Capturing diverse microbial sequence with comprehensive and scalable probe design
…, G Barbosa-Lima, YR Vieira, LM Paul, AL Tan… - BioRxiv, 2018 - biorxiv.org
Metagenomic sequencing has the potential to transform microbial detection and
characterization, but new tools are needed to improve its sensitivity. We developed CATCH (Compact …
characterization, but new tools are needed to improve its sensitivity. We developed CATCH (Compact …
International travelers and genomics uncover a 'hidden'Zika outbreak
…, S Saraf, K Gangavarapu, A Watts, AL Tan… - bioRxiv, 2018 - biorxiv.org
The ongoing Zika epidemic in the Americas has challenged public health surveillance,
response, and control systems. Even as the epidemic appears to be near its end in the Americas, …
response, and control systems. Even as the epidemic appears to be near its end in the Americas, …
Genome sequencing reveals Zika virus diversity and spread in the Americas
…, E Delatorre, YR Vieira, LM Paul, AL Tan… - bioRxiv, 2017 - biorxiv.org
Despite great attention given to the recent Zika virus (ZIKV) epidemic in the Americas, much
remains unknown about its epidemiology and evolution, in part due to a lack of genomic data…
remains unknown about its epidemiology and evolution, in part due to a lack of genomic data…