User profiles for Anatoly B. Kolomeisky
Anatoly KolomeiskyProfessor of Chemistry, Professor of Chemical and Biomolecular Engineering, Professor of … Verified email at rice.edu Cited by 10404 |
Phase diagram of one-dimensional driven lattice gases with open boundaries
AB Kolomeisky, GM Schütz… - Journal of Physics A …, 1998 - iopscience.iop.org
We consider the asymmetric simple exclusion process (ASEP) with open boundaries and
other driven stochastic lattice gases of particles entering, hopping and leaving a one-…
other driven stochastic lattice gases of particles entering, hopping and leaving a one-…
Simple mechanochemistry describes the dynamics of kinesin molecules
ME Fisher, AB Kolomeisky - Proceedings of the National …, 2001 - National Acad Sciences
… 6B provides predictions for the variation of the randomness under assisting (and resisting)
loads at fixed [ATP], based on the same N = 2 model with a processive step of mechanicity M …
loads at fixed [ATP], based on the same N = 2 model with a processive step of mechanicity M …
Molecular machines open cell membranes
…, LG Nilewski, G Duret, A Aliyan, AB Kolomeisky… - Nature, 2017 - nature.com
Beyond the more common chemical delivery strategies, several physical techniques are
used to open the lipid bilayers of cellular membranes 1 . These include using electric 2 and …
used to open the lipid bilayers of cellular membranes 1 . These include using electric 2 and …
Molecular motors: a theorist's perspective
AB Kolomeisky, ME Fisher - Annu. Rev. Phys. Chem., 2007 - annualreviews.org
Individual molecular motors, or motor proteins, are enzymatic molecules that convert
chemical energy, typically obtained from the hydrolysis of ATP (adenosine triphosphate), into …
chemical energy, typically obtained from the hydrolysis of ATP (adenosine triphosphate), into …
DLPacker: Deep learning for prediction of amino acid side chain conformations in proteins
Prediction of side chain conformations of amino acids in proteins (also termed “packing”) is
an important and challenging part of protein structure prediction with many interesting …
an important and challenging part of protein structure prediction with many interesting …
The force exerted by a molecular motor
ME Fisher, AB Kolomeisky - Proceedings of the National …, 1999 - National Acad Sciences
The stochastic driving force exerted by a single molecular motor (eg, a kinesin, or myosin)
moving on a periodic molecular track (microtubule, actin filament, etc.) is discussed from a …
moving on a periodic molecular track (microtubule, actin filament, etc.) is discussed from a …
Trade-offs between error, speed, noise, and energy dissipation in biological processes with proofreading
JD Mallory, AB Kolomeisky… - … of Physical Chemistry B, 2019 - ACS Publications
High accuracy of major biological processes relies on the ability of the participating enzymatic
molecules to preferentially select the correct substrate from a pool of chemically similar …
molecules to preferentially select the correct substrate from a pool of chemically similar …
Direct detection of molecular intermediates from first-passage times
All natural phenomena are governed by energy landscapes. However, the direct measurement
of this fundamental quantity remains challenging, particularly in complex systems …
of this fundamental quantity remains challenging, particularly in complex systems …
Physics of protein–DNA interactions: mechanisms of facilitated target search
AB Kolomeisky - Physical Chemistry Chemical Physics, 2011 - pubs.rsc.org
One of the most critical aspects of protein–DNA interactions is the ability of protein
molecules to quickly find and recognize specific target sequences on DNA. Experimental …
molecules to quickly find and recognize specific target sequences on DNA. Experimental …
Polymer translocation through a long nanopore
E Slonkina, AB Kolomeisky - The Journal of chemical physics, 2003 - pubs.aip.org
Polymer translocation through a nanopore in a membrane is investigated theoretically. Recent
experiments on voltage-driven DNA and RNA translocations through a nanopore indicate …
experiments on voltage-driven DNA and RNA translocations through a nanopore indicate …