[PDF][PDF] SARS-CoV-2 variant Delta rapidly displaced variant Alpha in the United States and led to higher viral loads

…, S Luo, S White, ET Cirulli, D Wyman, A Dei Rossi… - Cell Reports …, 2022 - cell.com
We report on the sequencing of 74,348 SARS-CoV-2 positive samples collected across the
United States and show that the Delta variant, first detected in the United States in March …

[PDF][PDF] Evidence for SARS-CoV-2 Delta and Omicron co-infections and recombination

A Bolze, T Basler, S White, A Dei Rossi, D Wyman… - Med, 2022 - cell.com
Background Between November 2021 and February 2022, severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2) Delta and Omicron variants co-circulated in the United …

[PDF][PDF] Rapid displacement of SARS-CoV-2 variant B. 1.1. 7 by B. 1.617. 2 and P. 1 in the United States

…, ET Cirulli, S Luo, S White, D Wyman, A Dei Rossi… - MedRxiv, 2021 - unmc.edu
The SARS-CoV-2 variant of concern B. 1.617. 2 displaced B. 1.1. 7 as the dominant variant
in England and other countries. This study aimed to determine whether B. 1.617. 2 was also …

[HTML][HTML] Whole transcriptome RNA-Seq analysis of breast cancer recurrence risk using formalin-fixed paraffin-embedded tumor tissue

…, M Crager, ML Liu, RJ Pelham, M Pho, AD Rossi… - PloS one, 2012 - journals.plos.org
RNA biomarkers discovered by RT-PCR-based gene expression profiling of archival
formalin-fixed paraffin-embedded (FFPE) tissue form the basis for widely used clinical diagnostic …

Identification of Omicron-Delta coinfections using PCR-based genotyping

…, E Lai, KR Jerome, T Basler, A Dei Rossi… - Microbiology …, 2022 - Am Soc Microbiol
… Jerome, a, b Tracy Basler, c Andrew Dei Rossi, c William Lee, c Alexander L. Greninger a,
b aDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, …

[HTML][HTML] Fusion transcript discovery in formalin-fixed paraffin-embedded human breast cancer tissues reveals a link to tumor progression

…, R Ambannavar, J Stephans, J Jeong, A Dei Rossi… - PLoS …, 2014 - journals.plos.org
The identification of gene fusions promises to play an important role in personalized cancer
treatment decisions. Many rare gene fusion events have been identified in fresh frozen solid …

SARS-CoV-2 Antiviral Prescribing Gaps Among Non-Hospitalized High-Risk Adults

…, LM McEwen, D Wyman, A Dei Rossi… - Clinical Infectious …, 2024 - academic.oup.com
Within a multi-state clinical cohort, SARS-CoV-2 antiviral prescribing patterns were evaluated
from April 2022-June 2023 among non-hospitalized SARS-CoV-2-infected patients with …

XBB. 1.5 mRNA COVID-19 Vaccination and Inpatient or Emergency Department Visits Among Adults Infected with SARS-CoV-2 JN. 1 and XBB-Lineage Variants

…, LM McEwen, ET Cirulli, D Wyman, A Dei Rossi… - medRxiv, 2024 - medrxiv.org
Within a multi-state viral genomic surveillance program, we conducted a case-control
analysis comparing prior receipt of XBB.1.5-adapted mRNA vaccination between SARS-CoV-2-…

Evidence for SARS-CoV-2 Delta and Omicron co-infections and recombination (preprint)

A Bolze, S White, T Basler, A Dei Rossi… - 2022 - pesquisa.bvsalud.org
Between November 2021 and February 2022, SARS-CoV-2 Delta and Omicron variants co-circulated
in the United States, allowing for co-infections and possible recombination events. …

Abstract P4-02-08: Global quantitative measures using next-generation sequencing for breast cancer presence outperform individual tumor markers in plasma

…, D Chan, K Bradley, F Collin, M Crager, A Dei Rossi… - Cancer Research, 2015 - AACR
Background: Analytically and clinically validated non-invasive blood tests that quantify breast
cancer burden and clinical drug response/resistance are greatly needed. Many groups …