[HTML][HTML] Gut microbial carbohydrate metabolism contributes to insulin resistance

…, Y Nakanishi, H Tsugawa, W Suda, ATJ Kwon… - Nature, 2023 - nature.com
Insulin resistance is the primary pathophysiology underlying metabolic syndrome and type
2 diabetes 1 , 2 . Previous metagenomic studies have described the characteristics of gut …

Functional annotation of human long noncoding RNAs via molecular phenotyping

…, A Kratz, M Kurowska-Stolarska, ATJ Kwon… - Genome …, 2020 - genome.cshlp.org
Long noncoding RNAs (lncRNAs) constitute the majority of transcripts in the mammalian
genomes, and yet, their functions remain largely unknown. As part of the FANTOM6 project, we …

[HTML][HTML] C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution

T Kouno, J Moody, ATJ Kwon, Y Shibayama… - Nature …, 2019 - nature.com
Single-cell transcriptomic profiling is a powerful tool to explore cellular heterogeneity. However,
most of these methods focus on the 3′-end of polyadenylated transcripts and provide …

[HTML][HTML] An era of single-cell genomics consortia

Y Ando, ATJ Kwon, JW Shin - Experimental & Molecular Medicine, 2020 - nature.com
The human body consists of 37 trillion single cells represented by over 50 organs that are
stitched together to make us who we are, yet we still have very little understanding about the …

Fungus-derived neoechinulin B as a novel antagonist of liver X receptor, identified by chemical genetics using a hepatitis C virus cell culture system

…, S Kamisuki, J Izaguirre-Carbonell, ATJ Kwon… - Journal of …, 2016 - Am Soc Microbiol
Cell culture systems reproducing virus replication can serve as unique models for the discovery
of novel bioactive molecules. Here, using a hepatitis C virus (HCV) cell culture system, …

[HTML][HTML] Analysis of enhancer–promoter interactions using CAGE and RADICL-Seq technologies

A Bonetti, ATJ Kwon, E Arner, P Carninci - Enhancers and Promoters …, 2021 - Springer
Regulation of gene expression is a key feature for higher eukaryotes and how chromatin
topology relates to gene activation is an intense area of research. Enhancer–promoter …

Development of p53 knockout U87MG cell line for unbiased drug delivery testing system using CRISPR-Cas9 and transcriptomic analysis

ATJ Kwon, K Mohri, S Takizawa, T Arakawa… - Journal of …, 2021 - Elsevier
Antibody-drug conjugates offers many advantages as a drug delivery platform that allows
for highly specific targeting of cell types and genes. Ideally, testing the efficacy of these …

[HTML][HTML] Evidence for a founder mutation causing DFNA5 hearing loss in East Asians

…, HJ Cho, JI Baek, T Ben-Yosef, TJ Kwon… - Journal of human …, 2010 - nature.com
Mutations in the DFNA5 gene are known to cause autosomal dominant non-syndromic
hearing loss (ADNSHL). To date, five DFNA5 mutations have been reported, all of which were …

Efficient Development of Platform Cell Lines Using CRISPR-Cas9 and Transcriptomics Analysis

ATJ Kwon, K Mohri, S Takizawa, T Arakawa… - bioRxiv, 2020 - biorxiv.org
Antibody-drug conjugates offers many advantages as a drug delivery platform that allows
for highly specific targeting of cell types and genes. Ideally, testing the efficacy of these …

Inference of transicriptional regulation network with gene expression data

ATJ Kwon - 2003 - open.library.ubc.ca
We propose a new method for finding potential regulatory relationships between pairs of
genes from microarray time series data and apply it to expression data for cell-cyle related …