Derivation of naive human embryonic stem cells

CB Ware, AM Nelson, B Mecham… - Proceedings of the …, 2014 - National Acad Sciences
The naïve pluripotent state has been shown in mice to lead to broad and more robust
developmental potential relative to primed mouse epiblast cells. The human naïve ES cell state …

[HTML][HTML] Facioscapulohumeral dystrophy: incomplete suppression of a retrotransposed gene

…, RJLF Lemmers, M Kyba, CB Ware, AM Nelson… - PLoS …, 2010 - journals.plos.org
Each unit of the D4Z4 macrosatellite repeat contains a retrotransposed gene encoding the
DUX4 double-homeobox transcription factor. Facioscapulohumeral dystrophy (FSHD) is …

MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries

…, EM Kroh, A Bendoraite, PS Mitchell, AM Nelson… - Stem …, 2008 - academic.oup.com
We used massively parallel pyrosequencing to discover and characterize microRNAs (miRNAs)
expressed in human embryonic stem cells (hESC). Sequencing of small RNA cDNA …

Self-renewal of human embryonic stem cells requires insulin-like growth factor-1 receptor and ERBB2 receptor signaling

…, DS Dauphin, S Shin, AM Nelson… - Blood, The Journal …, 2007 - ashpublications.org
Despite progress in developing defined conditions for human embryonic stem cell (hESC)
cultures, little is known about the cell-surface receptors that are activated under conditions …

Fixed single-cell transcriptomic characterization of human radial glial diversity

…, AM Doyle, S Jang, SI Shehata, AM Nelson… - Nature …, 2016 - nature.com
The diverse progenitors that give rise to the human neocortex have been difficult to
characterize because progenitors, particularly radial glia (RG), are rare and are defined by a …

[HTML][HTML] Integrated intracellular organization and its variations in human iPS cells

…, IA Mueller, TL Murphy-Stevens, A Nath, AM Nelson… - Nature, 2023 - nature.com
Understanding how a subset of expressed genes dictates cellular phenotype is a considerable
challenge owing to the large numbers of molecules involved, their combinatorics and the …

Systematic gene tagging using CRISPR/Cas9 in human stem cells to illuminate cell organization

…, J Arakaki, MA Fuqua, A Nelson… - Molecular biology of …, 2017 - Am Soc Cell Biol
We present a CRISPR/Cas9 genome-editing strategy to systematically tag endogenous proteins
with fluorescent tags in human induced pluripotent stem cells (hiPSC). To date, we have …

Characterization of microRNAs involved in embryonic stem cell states

…, I Ivanovska, K Mehta, S Song, A Nelson… - Stem cells and …, 2010 - liebertpub.com
Studies of embryonic stem cells (ESCs) reveal that these cell lines can be derived from differing
stages of embryonic development. We analyzed common changes in the expression of …

[PDF][PDF] Histone deacetylase inhibition elicits an evolutionarily conserved self-renewal program in embryonic stem cells

CB Ware, L Wang, BH Mecham, L Shen, AM Nelson… - Cell stem cell, 2009 - cell.com
Recent evidence indicates that mouse and human embryonic stem cells (ESCs) are fixed at
different developmental stages, with the former positioned earlier. We show that a narrow …

[PDF][PDF] A single-cell roadmap of lineage bifurcation in human ESC models of embryonic brain development

…, A Jayabalu, RC May, S Melton, AM Nelson… - Cell stem cell, 2017 - cell.com
During human brain development, multiple signaling pathways generate diverse cell types
with varied regional identities. Here, we integrate single-cell RNA sequencing and clonal …