User profiles for Anil S. Thanki
 | Anil ThankiOther name: Anil S Thanki European Bioinformatics Institute Verified email at ebi.ac.uk Cited by 204 |
Convergent loss of an EDS1/PAD4 signaling pathway in several plant lineages reveals coevolved components of plant immunity and drought response
Plant innate immunity relies on nucleotide binding leucine-rich repeat receptors (NLRs) that
recognize pathogen-derived molecules and activate downstream signaling pathways. We …
recognize pathogen-derived molecules and activate downstream signaling pathways. We …
[HTML][HTML] Anatomy of BioJS, an open source community for the life sciences
10.7554/eLife.07009.001 BioJS is an open source software project that develops visualization
tools for different types of biological data. Here we report on the factors that influenced the …
tools for different types of biological data. Here we report on the factors that influenced the …
[HTML][HTML] BioJS: an open source standard for biological visualisation–its status in 2014
BioJS is a community-based standard and repository of functional components to represent
biological information on the web. The development of BioJS has been prompted by the …
biological information on the web. The development of BioJS has been prompted by the …
GeneSeqToFamily: a Galaxy workflow to find gene families based on the Ensembl Compara GeneTrees pipeline
Background Gene duplication is a major factor contributing to evolutionary novelty, and the
contraction or expansion of gene families has often been associated with morphological, …
contraction or expansion of gene families has often been associated with morphological, …
ViCTree: an automated framework for taxonomic classification from protein sequences
Motivation The increasing rate of submission of genetic sequences into public databases is
providing a growing resource for classifying the organisms that these sequences represent. …
providing a growing resource for classifying the organisms that these sequences represent. …
Aequatus: An open-source homology browser
Background Phylogenetic information inferred from the study of homologous genes helps
us to understand the evolution of genes and gene families, including the identification of …
us to understand the evolution of genes and gene families, including the identification of …
[HTML][HTML] wigExplorer, a BioJS component to visualise wig data
wigExplorer is a BioJS component whose main purpose is to provide a platform for visualisation
of wig-formatted data. Wig files are extensively used by genome browsers such as the …
of wig-formatted data. Wig files are extensively used by genome browsers such as the …
Expression Atlas update: insights from sequencing data at both bulk and single cell level
Expression Atlas ( www.ebi.ac.uk/gxa ) and its newest counterpart the Single Cell Expression
Atlas ( www.ebi.ac.uk/gxa/sc ) are EMBL-EBI’s knowledgebases for gene and protein …
Atlas ( www.ebi.ac.uk/gxa/sc ) are EMBL-EBI’s knowledgebases for gene and protein …
TGAC Browser: visualisation solutions for big data in the genomic era
We present a new web‐based genomics browser with novel rendering and annotation
capabilities designed to overcome some of the shortcomings in available approaches. Most of the …
capabilities designed to overcome some of the shortcomings in available approaches. Most of the …
[HTML][HTML] DNAContentViewer a BioJS component to visualise GC/AT Content
Compositional GC/AT content of DNA sequences is a useful feature in genome analysis. GC/AT
content provides useful information about evolution, structure and function of genomes, …
content provides useful information about evolution, structure and function of genomes, …