User profiles for Anisha Luthra

Anisha Luthra

Bioinformatics Software Engineer, Memorial Sloan Kettering Cancer Center
Verified email at mskcc.org
Cited by 745

[PDF][PDF] Genomic characterization of metastatic patterns from prospective clinical sequencing of 25,000 patients

B Nguyen, C Fong, A Luthra, SA Smith, RG DiNatale… - Cell, 2022 - cell.com
Metastatic progression is the main cause of death in cancer patients, whereas the underlying
genomic mechanisms driving metastasis remain largely unknown. Here, we assembled …

Genomic and transcriptomic determinants of response to neoadjuvant therapy in rectal cancer

…, DM Omer, DN Khalil, K Ganesh, X Qu, A Luthra… - Nature medicine, 2022 - nature.com
The incidence of rectal cancer is increasing in patients younger than 50 years. Locally advanced
rectal cancer is still treated with neoadjuvant radiation, chemotherapy and surgery, but …

[HTML][HTML] Clinical sequencing of soft tissue and bone sarcomas delineates diverse genomic landscapes and potential therapeutic targets

…, A Zehir, MM Gounder, TG Bowler, A Luthra… - Nature …, 2022 - nature.com
The genetic, biologic, and clinical heterogeneity of sarcomas poses a challenge for the
identification of therapeutic targets, clinical research, and advancing patient care. Because there …

Reducing resistance allele formation in CRISPR gene drive

…, J Liu, SY Oh, R Reeves, A Luthra… - Proceedings of the …, 2018 - National Acad Sciences
CRISPR homing gene drives can convert heterozygous cells with one copy of the drive
allele into homozygotes, thereby enabling super-Mendelian inheritance. Such a mechanism …

Patterns of metastatic disease in patients with cancer derived from natural language processing of structured CT radiology reports over a 10-year period

RKG Do, K Lupton, PI Causa Andrieu, A Luthra, M Taya… - Radiology, 2021 - pubs.rsna.org
Background Patterns of metastasis in cancer are increasingly relevant to prognostication
and treatment planning but have historically been documented by means of autopsy series. …

CRISPR gene drive efficiency and resistance rate is highly heritable with no common genetic loci of large effect

J Champer, Z Wen, A Luthra, R Reeves, J Chung… - Genetics, 2019 - academic.oup.com
Gene drives could allow for control of vector-borne diseases by directly suppressing vector
populations or spreading genetic payloads designed to reduce pathogen transmission. …

Outcomes and molecular features of brain metastasis in gastroesophageal adenocarcinoma

C Tsai, B Nguyen, A Luthra, JF Chou, L Feder… - JAMA Network …, 2022 - jamanetwork.com
Importance Brain metastasis (BrM) in gastroesophageal adenocarcinoma (GEA) is a rare
and poorly understood phenomenon associated with poor prognosis. Objectives To examine …

[HTML][HTML] Rectal cancer after prostate radiation: a complex and controversial disease

…, FS Verheij, JB Yuval, R Rosen, NRA Beets, A Luthra… - Cancers, 2023 - mdpi.com
Simple Summary Radiation therapy is commonly used in the treatment of prostate cancer,
but it is a carcinogen itself. Long-term survivors of prostate cancer who were treated with …

Maximum likelihood estimation of fitness components in experimental evolution

…, AM Langmüller, C Liu, J Chung, R Reeves, A Luthra… - Genetics, 2019 - academic.oup.com
Estimating fitness differences between allelic variants is a central goal of experimental
evolution. Current methods for inferring such differences from allele frequency time series …

Computational methods and translational applications for targeted next‐generation sequencing platforms

A Luthra, B Mastrogiacomo, SA Smith… - Genes …, 2022 - Wiley Online Library
During the past decade, next‐generation sequencing (NGS) technologies have become
widely adopted in cancer research and clinical care. Common applications within the clinical …