User profiles for Aryeh Warmflasha
Aryeh WarmflashBiosciences, Biochemistry and Cell Biology, Rice University Verified email at rice.edu Cited by 4131 |
Stem-cell-based embryo models for fundamental research and translation
Despite its importance, understanding the early phases of human development has been
limited by availability of human samples. The recent emergence of stem-cell-derived embryo …
limited by availability of human samples. The recent emergence of stem-cell-derived embryo …
A method to recapitulate early embryonic spatial patterning in human embryonic stem cells
Embryos allocate cells to the three germ layers in a spatially ordered sequence. Human
embryonic stem cells (hESCs) can generate the three germ layers in culture; however, …
embryonic stem cells (hESCs) can generate the three germ layers in culture; however, …
[HTML][HTML] Multilineage transcriptional priming and determination of alternate hematopoietic cell fates
P Laslo, CJ Spooner, A Warmflash, DW Lancki, HJ Lee… - Cell, 2006 - cell.com
Hematopoietic stem cells and their progenitors exhibit multilineage patterns of gene
expression. Molecular mechanisms underlying the generation and refinement of these patterns …
expression. Molecular mechanisms underlying the generation and refinement of these patterns …
Human neural tube morphogenesis in vitro by geometric constraints
Understanding human organ formation is a scientific challenge with far-reaching medical
implications 1 , 2 . Three-dimensional stem-cell cultures have provided insights into human cell …
implications 1 , 2 . Three-dimensional stem-cell cultures have provided insights into human cell …
Morphogen and community effects determine cell fates in response to BMP4 signaling in human embryonic stem cells
Paracrine signals maintain developmental states and create cell fate patterns in vivo and
influence differentiation outcomes in human embryonic stem cells (hESCs) in vitro. Systematic …
influence differentiation outcomes in human embryonic stem cells (hESCs) in vitro. Systematic …
[HTML][HTML] Roadmap for the multiscale coupling of biochemical and mechanical signals during development
The way in which interactions between mechanics and biochemistry lead to the emergence
of complex cell and tissue organization is an old question that has recently attracted …
of complex cell and tissue organization is an old question that has recently attracted …
A novel self-organizing embryonic stem cell system reveals signaling logic underlying the patterning of human ectoderm
…, R Hodge, AA Qutub, A Warmflash - …, 2019 - journals.biologists.com
During development, the ectoderm is patterned by a combination of BMP and WNT signaling.
Research in model organisms has provided substantial insight into this process; however, …
Research in model organisms has provided substantial insight into this process; however, …
[HTML][HTML] Dissecting the dynamics of signaling events in the BMP, WNT, and NODAL cascade during self-organized fate patterning in human gastruloids
During gastrulation, the pluripotent epiblast self-organizes into the 3 germ layers—endoderm,
mesoderm and ectoderm, which eventually form the entire embryo. Decades of research …
mesoderm and ectoderm, which eventually form the entire embryo. Decades of research …
Self-organization of human embryonic stem cells on micropatterns
Fate allocation in the gastrulating embryo is spatially organized as cells differentiate into
specialized cell types depending on their positions with respect to the body axes. There is a …
specialized cell types depending on their positions with respect to the body axes. There is a …
Umbrella sampling for nonequilibrium processes
A Warmflash, P Bhimalapuram… - The Journal of chemical …, 2007 - pubs.aip.org
The authors introduce an algorithm for determining the steady-state probability distribution
of an ergodic system arbitrarily far from equilibrium. By enforcing equal sampling of different …
of an ergodic system arbitrarily far from equilibrium. By enforcing equal sampling of different …