[HTML][HTML] Measures for interoperability of phenotypic data: minimum information requirements and formatting

…, D Chen, G Cornut, F Fiorani, W Frohmberg, A Junker… - Plant Methods, 2016 - Springer
Background Plant phenotypic data shrouds a wealth of information which, when accurately
analysed and linked to other data types, brings to light the knowledge about the mechanisms …

[HTML][HTML] Optimizing experimental procedures for quantitative evaluation of crop plant performance in high throughput phenotyping systems

A Junker, MM Muraya, K Weigelt-Fischer… - Frontiers in plant …, 2015 - frontiersin.org
Detailed and standardized protocols for plant cultivation in environmentally controlled
conditions are an essential prerequisite to conduct reproducible experiments with precisely …

[HTML][HTML] VANTED v2: a framework for systems biology applications

H Rohn, A Junker, A Hartmann, E Grafahrend-Belau… - BMC systems …, 2012 - Springer
Background Experimental datasets are becoming larger and increasingly complex, spanning
different data domains, thereby expanding the requirements for respective tool support for …

Enabling reusability of plant phenomic datasets with MIAPPE 1.1

…, B Droesbeke, R Finkers, K Gruden, A Junker… - New …, 2020 - Wiley Online Library
Enabling data reuse and knowledge discovery is increasingly critical in modern science,
and requires an effort towards standardising data publication practices. This is particularly …

Toward the identification and regulation of the Arabidopsis thaliana ABI3 regulon

…, M Mohr, I Grosse, U Hähnel, A Junker… - Nucleic acids …, 2012 - academic.oup.com
The plant-specific, B3 domain-containing transcription factor ABSCISIC ACID INSENSITIVE3
(ABI3) is an essential component of the regulatory network controlling the development and …

Elongation‐related functions of LEAFY COTYLEDON1 during the development of Arabidopsis thaliana

A Junker, G Mönke, T Rutten, J Keilwagen… - The Plant …, 2012 - Wiley Online Library
The transcription factor LEAFY COTYLEDON1 (LEC1) controls aspects of early embryogenesis
and seed maturation in Arabidopsis thaliana. To identify components of the LEC1 regulon…

Genetic variation of growth dynamics in maize (Zea mays L.) revealed through automated non‐invasive phenotyping

MM Muraya, J Chu, Y Zhao, A Junker… - The Plant …, 2017 - Wiley Online Library
Hitherto, most quantitative trait loci of maize growth and biomass yield have been identified
for a single time point, usually the final harvest stage. Through this approach cumulative …

PGP repository: a plant phenomics and genomics data publication infrastructure

D Arend, A Junker, U Scholz, D Schüler, J Wylie… - Database, 2016 - academic.oup.com
Plant genomics and phenomics represents the most promising tools for accelerating yield
gains and overcoming emerging crop productivity bottlenecks. However, accessing this wealth …

Multiscale metabolic modeling: dynamic flux balance analysis on a whole-plant scale

E Grafahrend-Belau, A Junker, A Eschenröder… - Plant …, 2013 - academic.oup.com
Plant metabolism is characterized by a unique complexity on the cellular, tissue, and organ
levels. On a whole-plant scale, changing source and sink relations accompanying plant …

[HTML][HTML] AtRD22 and AtUSPL1, Members of the Plant-Specific BURP Domain Family Involved in Arabidopsis thaliana Drought Tolerance

VT Harshavardhan, LE Van Son, C Seiler, A Junker… - PloS one, 2014 - journals.plos.org
Crop plants are regularly challenged by a range of environmental stresses which typically
retard their growth and ultimately compromise economic yield. The stress response involves …