User profiles for Aurelien Dugourd
Aurélien DugourdPost-doc, Heidelberg University Verified email at ukaachen.de Cited by 2435 |
[PDF][PDF] The global phosphorylation landscape of SARS-CoV-2 infection
The causative agent of the coronavirus disease 2019 (COVID-19) pandemic, severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2), has infected millions and killed hundreds …
respiratory syndrome coronavirus 2 (SARS-CoV-2), has infected millions and killed hundreds …
decoupleR: ensemble of computational methods to infer biological activities from omics data
…, S Müller-Dott, P Taus, A Dugourd… - Bioinformatics …, 2022 - academic.oup.com
Many methods allow us to extract biological activities from omics data using information from
prior knowledge resources, reducing the dimensionality for increased statistical power and …
prior knowledge resources, reducing the dimensionality for increased statistical power and …
[PDF][PDF] Gli1+ mesenchymal stromal cells are a key driver of bone marrow fibrosis and an important cellular therapeutic target
RK Schneider, A Mullally, A Dugourd, F Peisker… - Cell stem cell, 2017 - cell.com
Bone marrow fibrosis (BMF) develops in various hematological and non-hematological
conditions and is a central pathological feature of myelofibrosis. Effective cell-targeted …
conditions and is a central pathological feature of myelofibrosis. Effective cell-targeted …
[PDF][PDF] NADH shuttling couples cytosolic reductive carboxylation of glutamine with glycolysis in cells with mitochondrial dysfunction
The bioenergetics and molecular determinants of the metabolic response to mitochondrial
dysfunction are incompletely understood, in part due to a lack of appropriate isogenic cellular …
dysfunction are incompletely understood, in part due to a lack of appropriate isogenic cellular …
Causal integration of multi‐omics data with prior knowledge to generate mechanistic hypotheses
Multi‐omics datasets can provide molecular insights beyond the sum of individual omics.
Various tools have been recently developed to integrate such datasets, but there are limited …
Various tools have been recently developed to integrate such datasets, but there are limited …
[PDF][PDF] Dynamic 3D proteomes reveal protein functional alterations at high resolution in situ
Biological processes are regulated by intermolecular interactions and chemical modifications
that do not affect protein levels, thus escaping detection in classical proteomic screens. We …
that do not affect protein levels, thus escaping detection in classical proteomic screens. We …
[HTML][HTML] Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data
The growing availability of single-cell data, especially transcriptomics, has sparked an
increased interest in the inference of cell-cell communication. Many computational tools were …
increased interest in the inference of cell-cell communication. Many computational tools were …
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
…, B De Meulder, S Ballereau, A Dugourd… - Molecular systems …, 2021 - embopress.org
We need to effectively combine the knowledge from surging literature with complex datasets
to propose mechanistic models of SARS‐CoV‐2 infection, improving data interpretation and …
to propose mechanistic models of SARS‐CoV‐2 infection, improving data interpretation and …
Metabolic communication by SGLT2 inhibition
BACKGROUND: SGLT2 (sodium-glucose cotransporter 2) inhibitors (SGLT2i) can protect the
kidneys and heart, but the underlying mechanism remains poorly understood. METHODS: …
kidneys and heart, but the underlying mechanism remains poorly understood. METHODS: …
[HTML][HTML] Dynamic partitioning of branched-chain amino acids-derived nitrogen supports renal cancer progression
M Sciacovelli, A Dugourd, LV Jimenez, M Yang… - Nature …, 2022 - nature.com
Metabolic reprogramming is critical for tumor initiation and progression. However, the exact
impact of specific metabolic changes on cancer progression is poorly understood. Here, we …
impact of specific metabolic changes on cancer progression is poorly understood. Here, we …