User profiles for Avinash Das Sahu

Avinash Sahu

University of New Mexico Cancer Center & TumorAI.org
Verified email at salud.unm.edu
Cited by 18108

Therapeutically increasing MHC-I expression potentiates immune checkpoint blockade

…, K Lim, J Conway, AK Tewari, Z Zeng, AD Sahu… - Cancer discovery, 2021 - AACR
MHC-I loss or downregulation in cancer cells is a major mechanism of resistance to T cell–based
immunotherapies. Our study reveals that birinapant may be used for patients with low …

CRISPR screens decode cancer cell pathways that trigger γδ T cell detection

MR Mamedov, S Vedova, JW Freimer, AD Sahu… - Nature, 2023 - nature.com
γδ T cells are potent anticancer effectors with the potential to target tumours broadly, independent
of patient-specific neoantigens or human leukocyte antigen background 1 , 2 , 3 , 4 – 5 …

[HTML][HTML] A landscape of response to drug combinations in non-small cell lung cancer

…, AA Friedman, A Amzallag, E Cortez, AD Sahu… - Nature …, 2023 - nature.com
Combination of anti-cancer drugs is broadly seen as way to overcome the often-limited efficacy
of single agents. The design and testing of combinations are however very challenging. …

[HTML][HTML] Immune receptor repertoires in pediatric and adult acute myeloid leukemia

J Zhang, X Hu, J Wang, AD Sahu, D Cohen, L Song… - Genome medicine, 2019 - Springer
Background Acute myeloid leukemia (AML), caused by the abnormal proliferation of
immature myeloid cells in the blood or bone marrow, is one of the most common hematologic …

[PDF][PDF] Beyond synthetic lethality: charting the landscape of pairwise gene expression states associated with survival in cancer

A Magen, AD Sahu, JS Lee, M Sharmin, A Lugo… - Cell reports, 2019 - cell.com
The phenotypic effect of perturbing a gene's activity depends on the activity level of other
genes, reflecting the notion that phenotypes are emergent properties of a network of …

[HTML][HTML] Clonal tracing reveals diverse patterns of response to immune checkpoint blockade

…, K Lim, J Wang, W Zhang, C Tokheim, AD Sahu… - Genome biology, 2020 - Springer
Background Immune checkpoint blockade (ICB) therapy has improved patient survival in a
variety of cancers, but only a minority of cancer patients respond. Multiple studies have …

[HTML][HTML] ChIPnorm: a statistical method for normalizing and identifying differential regions in histone modification ChIP-seq libraries

NU Nair, AD Sahu, P Bucher, BME Moret - 2012 - journals.plos.org
The advent of high-throughput technologies such as ChIP-seq has made possible the study
of histone modifications. A problem of particular interest is the identification of regions of the …

Genome‐wide prediction of synthetic rescue mediators of resistance to targeted and immunotherapy

AD Sahu, JS Lee, Z Wang, G Zhang… - Molecular systems …, 2019 - embopress.org
Most patients with advanced cancer eventually acquire resistance to targeted therapies,
spurring extensive efforts to identify molecular events mediating therapy resistance. Many of …

[HTML][HTML] A community challenge to predict clinical outcomes after immune checkpoint blockade in non-small cell lung cancer

…, W Zhang, Y Zhang, Z Zeng, A Das Sahu… - Journal of Translational …, 2024 - Springer
Background Predictive biomarkers of immune checkpoint inhibitor (ICI) efficacy are currently
lacking for non-small cell lung cancer (NSCLC). Here, we describe the results from the Anti–…

[HTML][HTML] Study of cell differentiation by phylogenetic analysis using histone modification data

…, Y Lin, A Manasovska, J Antic, P Grnarova, AD Sahu… - BMC …, 2014 - Springer
Background In cell differentiation, a cell of a less specialized type becomes one of a more
specialized type, even though all cells have the same genome. Transcription factors and …