[HTML][HTML] RetroPath2. 0: a retrosynthesis workflow for metabolic engineers

B Delépine, T Duigou, P Carbonell, JL Faulon - Metabolic engineering, 2018 - Elsevier
Synthetic biology applied to industrial biotechnology is transforming the way we produce
chemicals. However, despite advances in the scale and scope of metabolic engineering, the …

IsoCor: isotope correction for high-resolution MS labeling experiments

P Millard, B Delépine, M Guionnet, M Heuillet… - …, 2019 - academic.oup.com
Mass spectrometry (MS) is widely used for isotopic studies of metabolism and other (bio)chemical
processes. Quantitative applications in systems and synthetic biology require to …

Sensing new chemicals with bacterial transcription factors

V Libis, B Delépine, JL Faulon - Current opinion in microbiology, 2016 - Elsevier
… Author links open overlay panel Vincent Libis 1 2 4 , Baudoin Delépine 1 2 4 , Jean-Loup
Faulon 1 2 3 … Delépine, J.-L. Faulon … Delépine, V. Libis, P. Carbonell, J.-…

Expanding biosensing abilities through computer-aided design of metabolic pathways

V Libis, B Delépine, JL Faulon - ACS synthetic biology, 2016 - ACS Publications
Detection of chemical signals is critical for cells in nature as well as in synthetic biology,
where they serve as inputs for designer circuits. Important progress has been made in the …

SensiPath: computer-aided design of sensing-enabling metabolic pathways

B Delépine, V Libis, P Carbonell… - Nucleic acids …, 2016 - academic.oup.com
Genetically-encoded biosensors offer a wide range of opportunities to develop advanced
synthetic biology applications. Circuits with the ability of detecting and quantifying intracellular …

[HTML][HTML] Flux Enforcement for Fermentative Production of 5-Aminovalerate and Glutarate by Corynebacterium glutamicum

C Haupka, B Delépine, M Irla, S Heux, VF Wendisch - Catalysts, 2020 - mdpi.com
Bio-based plastics represent an increasing percentage of the plastics economy. The fermentative
production of bioplastic monomer 5-aminovalerate (5AVA), which can be converted to …

[HTML][HTML] A dataset of small molecules triggering transcriptional and translational cellular responses

M Koch, A Pandi, B Delépine, JL Faulon - Data in brief, 2018 - ncbi.nlm.nih.gov
The aim of this dataset is to identify and collect compounds that are known for being detectable
by a living cell, through the action of a genetically encoded biosensor and is centred on …

[HTML][HTML] Evaluation of Heterologous Biosynthetic Pathways for Methanol-Based 5-Aminovalerate Production by Thermophilic Bacillus methanolicus

LF Brito, M Irla, I Nærdal, SB Le, B Delépine… - … in Bioengineering and …, 2021 - frontiersin.org
The use of methanol as carbon source for biotechnological processes has recently attracted
great interest due to its relatively low price, high abundance, high purity, and the fact that it is …

Charting the metabolic landscape of the facultative methylotroph Bacillus methanolicus

B Delépine, MG López, M Carnicer, CM Vicente… - Msystems, 2020 - Am Soc Microbiol
Bacillus methanolicus MGA3 is a thermotolerant and relatively fast-growing methylotroph
able to secrete large quantities of glutamate and lysine. These natural characteristics make B. …

Computer-aided design (cad) tools for bioproduction and biosensing pathway engineering

B Delépine - 2017 - theses.fr
Les récentes avancées en biologie des systèmes et en biologie synthétique contribuent
déjà au fleurissement d'applications en ingénierie métabolique visant une bioproduction …