A single-cell resolution map of mouse hematopoietic stem and progenitor cell differentiation

…, NK Wilson, DG Kent, B Göttgens - Blood, The Journal …, 2016 - ashpublications.org
Maintenance of the blood system requires balanced cell fate decisions by hematopoietic stem
and progenitor cells (HSPCs). Because cell fate choices are executed at the individual cell …

[PDF][PDF] Iterative single-cell analyses define the transcriptome of the first functional hematopoietic stem cells

…, X Wang, A Maglitto, SA Mariani, W Jawaid, B Göttgens… - Cell Reports, 2020 - cell.com
Whereas hundreds of cells in the mouse embryonic aorta transdifferentiate to hematopoietic
cells, only very few establish hematopoietic stem cell (HSC) identity at a single time point. …

The human cell atlas

…, R Eils, W Enard, A Farmer, L Fugger, B Göttgens… - elife, 2017 - elifesciences.org
10.7554/eLife.27041.001 The recent advent of methods for high-throughput single-cell
molecular profiling has catalyzed a growing sense in the scientific community that the time is ripe …

[HTML][HTML] PAGA: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells

…, FK Hamey, M Plass, J Solana, JS Dahlin, B Göttgens… - Genome biology, 2019 - Springer
Single-cell RNA-seq quantifies biological heterogeneity across both discrete cell types and
continuous cell transitions. Partition-based graph abstraction (PAGA) provides an …

[PDF][PDF] Combinatorial transcriptional control in blood stem/progenitor cells: genome-wide analysis of ten major transcriptional regulators

…, E Dzierzak, JE Pimanda, MFTR De Bruijn, B Göttgens - Cell stem cell, 2010 - cell.com
Combinatorial transcription factor (TF) interactions control cellular phenotypes and, therefore,
underpin stem cell formation, maintenance, and differentiation. Here, we report the genome…

[PDF][PDF] Longitudinal analysis reveals that delayed bystander CD8+ T cell activation and early immune pathology distinguish severe COVID-19 from mild disease

…, EJM Toonen, MP Weekes, B Göttgens… - Immunity, 2021 - cell.com
The kinetics of the immune changes in COVID-19 across severity groups have not been
rigorously assessed. Using immunophenotyping, RNA sequencing, and serum cytokine analysis…

From haematopoietic stem cells to complex differentiation landscapes

E Laurenti, B Göttgens - Nature, 2018 - nature.com
The development of mature blood cells from haematopoietic stem cells has long served as a
model for stem-cell research, with the haematopoietic differentiation tree being widely used …

[PDF][PDF] Functionally distinct subsets of lineage-biased multipotent progenitors control blood production in normal and regenerative conditions

…, FJ Calero-Nieto, AD Leavitt, JM Stuart, B Göttgens… - Cell stem cell, 2015 - cell.com
Despite great advances in understanding the mechanisms underlying blood production,
lineage specification at the level of multipotent progenitors (MPPs) remains poorly understood. …

JAK2 phosphorylates histone H3Y41 and excludes HP1α from chromatin

MA Dawson, AJ Bannister, B Göttgens, SD Foster… - Nature, 2009 - nature.com
Activation of Janus kinase 2 (JAK2) by chromosomal translocations or point mutations is a
frequent event in haematological malignancies 1 , 2 , 3 , 4 , 5 , 6 . JAK2 is a non-receptor …

[PDF][PDF] Epigenomic profiling of young and aged HSCs reveals concerted changes during aging that reinforce self-renewal

…, R Chen, H Gu, C Bock, A Meissner, B Göttgens… - Cell stem cell, 2014 - cell.com
To investigate the cell-intrinsic aging mechanisms that erode the function of somatic stem cells
during aging, we have conducted a comprehensive integrated genomic analysis of young …