User profiles for Bhavika Mam

Bhavika Mam, PhD

QIAGEN Digital Insights, Former Postdoc at Stanford University, School of Medicine
Verified email at stanford.edu
Cited by 74

DEELIG: A deep learning approach to predict protein-ligand binding affinity

A Ahmed, B Mam… - Bioinformatics and Biology …, 2021 - journals.sagepub.com
Protein-ligand binding prediction has extensive biological significance. Binding affinity helps
in understanding the degree of protein-ligand interactions and is a useful measure in drug …

[HTML][HTML] Minus-C subfamily has diverged from Classic odorant-binding proteins in honeybees

B Mam, SD Karpe, R Sowdhamini - Apidologie, 2023 - Springer
Odorant-binding proteins (OBPs) in insects bind to volatile chemical cues that are important
in regulating insect behavior. It is hypothesized that OBPs bind with specificity to certain …

[HTML][HTML] Exploring the medicinally important secondary metabolites landscape through the lens of transcriptome data in fenugreek (Trigonella foenum graecum L.)

…, K Harini, KM Shafi, N Kalmankar, SD Karpe, B Mam… - Scientific Reports, 2022 - nature.com
Fenugreek (Trigonella foenum-graecum L.) is a self-pollinated leguminous crop belonging to
the Fabaceae family. It is a multipurpose crop used as herb, spice, vegetable and forage. It …

Influence of pH on indole-dependent heterodimeric interactions between Anopheles gambiae odorant-binding proteins OBP1 and OBP4

B Mam, KE Tsitsanou, PGV Liggri, F Saitta… - International Journal of …, 2023 - Elsevier
Insect Odorant Binding Proteins (OBPs) constitute important components of their olfactory
apparatus, as they are essential for odor recognition. OBPs undergo conformational changes …

Molecular and functional characterization of buffalo nasal epithelial odorant binding proteins and their structural insights by in silico and biochemical approaches

C Manikkaraja, M Bhavika, R Singh… - Journal of …, 2022 - Taylor & Francis
The olfactory system is capable of detecting and distinguishing thousands of environmental
odorants that play a key role in reproduction, social behaviours including pheromones …

[HTML][HTML] SoCCer: A pipeline to identify classes of soluble proteins in chemical communication in insect genomes

B Mam, R Sowdhamini - 2020 - protocolexchange.researchsquare …
Insects require olfactory cues to perform a number of processes. With an increasing number
of insect genomes that are getting realized, there is a need for an automatic method to …

DEELIG: A Deep Learning-based approach to predict protein-ligand binding affinity

A Ahmed, B Mam, R Sowdhamini - bioRxiv, 2020 - biorxiv.org
Protein-ligand binding prediction has extensive biological significance. Binding affinity helps
in understanding the degree of protein-ligand interactions and has wide protein applications…

[HTML][HTML] Dynamic Methylome Modification is Associated with Mutational Signatures in Aging and the Etiology of Disease

…, N Pasha, G Kumar, N Nagarajan, B Mam… - Archives of Clinical …, 2022 - fortuneonline.org
Reversible epigenetic changes within the loci of genes that regulate critical cell processes
have recently emerged as important biomarkers of disease pathology. It is then natural to …

Genome-wide survey of odorant-binding proteins in the dwarf honey bee Apis florea

B Mam, S Karpe, R Sowdhamini - bioRxiv, 2021 - biorxiv.org
Odorant binding proteins (OBPs) in insects bind to volatile chemical cue and help in their
binding to odorant receptors. The odor coding hypothesis states that OBPs may bind with …

Ancient Migrations-The first complete genome assembly, annotation and variants of the Zoroastrian-Parsi community of India

…, K Krishnasamy, N Nagarajan, S Mutya, B Mam… - bioRxiv, 2021 - biorxiv.org
With the advent of Next Generation Sequencing, many population specific whole genome
sequences published thus far, predominantly represent individuals of European ancestry. …