User profiles for Bingshan Li

Bingshan Li

- Verified email at vanderbilt.edu - Cited by 26030

Bingshan Li

- Verified email at vanderbilt.edu - Cited by 13282

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

…, K James Durbin, R Simons, Y Ren, XZ Song, B Li… - Nature, 2004 - nature.com
The laboratory rat (Rattus norvegicus) is an indispensable tool in experimental medicine and
drug development, having made inestimable contributions to human health. We report here …

[PDF][PDF] Methods for detecting associations with rare variants for common diseases: application to analysis of sequence data

B Li, SM Leal - The American Journal of Human Genetics, 2008 - cell.com
Although whole-genome association studies using tagSNPs are a powerful approach for
detecting common variants, they are underpowered for detecting associations with rare variants…

[PDF][PDF] Trans-ethnic and ancestry-specific blood-cell genetics in 746,667 individuals from 5 global populations

…, Y Li, AS Butterworth, JF Gauchat, CWK Chiang, B Li… - Cell, 2020 - cell.com
Most loci identified by GWASs have been found in populations of European ancestry (EUR).
In trans-ethnic meta-analyses for 15 hematological traits in 746,667 participants, including …

RVTESTS: an efficient and comprehensive tool for rare variant association analysis using sequence data

X Zhan, Y Hu, B Li, GR Abecasis, DJ Liu - Bioinformatics, 2016 - academic.oup.com
Motivation: Next-generation sequencing technologies have enabled the large-scale assessment
of the impact of rare and low-frequency genetic variants for complex human diseases. …

[HTML][HTML] Transcriptome analysis of psoriasis in a large case–control sample: RNA-seq provides insights into disease mechanisms

B Li, LC Tsoi, WR Swindell, JE Gudjonsson… - Journal of Investigative …, 2014 - Elsevier
To increase our understanding of psoriasis, we used high-throughput complementary DNA
sequencing (RNA-seq) to assay the transcriptomes of lesional psoriatic and normal skin. We …

[HTML][HTML] Drug repurposing for Alzheimer's disease from 2012–2022—A 10-year literature review

ME Grabowska, A Huang, Z Wen, B Li… - Frontiers in …, 2023 - frontiersin.org
Background: Alzheimer’s disease (AD) is a debilitating neurodegenerative condition with
few treatment options available. Drug repurposing studies have sought to identify existing …

Large-scale genetic study in East Asians identifies six new loci associated with colorectal cancer risk

…, J Long, J Shi, W Wen, G Yang, Y Zhang, C Li, B Li… - Nature …, 2014 - nature.com
Known genetic loci explain only a small proportion of the familial relative risk of colorectal
cancer (CRC). We conducted a genome-wide association study of CRC in East Asians with …

[PDF][PDF] Whole-exome sequencing identifies rare and low-frequency coding variants associated with LDL cholesterol

…, DM Jordan, A Kiezun, G Lettre, B Li, M Li… - The American Journal of …, 2014 - cell.com
Elevated low-density lipoprotein cholesterol (LDL-C) is a treatable, heritable risk factor for
cardiovascular disease. Genome-wide association studies (GWASs) have identified 157 …

[HTML][HTML] Analysis of long non-coding RNAs highlights tissue-specific expression patterns and epigenetic profiles in normal and psoriatic skin

…, JE Gudjonsson, T Tejasvi, MK Sarkar, B Li… - Genome biology, 2015 - Springer
Background Although analysis pipelines have been developed to use RNA-seq to identify
long non-coding RNAs (lncRNAs), inference of their biological and pathological relevance …

A transcriptome-wide association study of 229,000 women identifies new candidate susceptibility genes for breast cancer

…, Q Cai, F Al-Ejeh, E Rozali, Q Wang, J Dennis, B Li… - Nature …, 2018 - nature.com
The breast cancer risk variants identified in genome-wide association studies explain only a
small fraction of the familial relative risk, and the genes responsible for these associations …