User profiles for Biter Bilen
 | biter bilenPostdoctoral fellow Verified email at stanford.edu Cited by 3932 |
[HTML][HTML] Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris: The Tabula Muris Consortium
…, AS Baghel, I Bakerman, I Bansal, D Berdnik, B Bilen… - Nature, 2018 - ncbi.nlm.nih.gov
We have created a compendium of single cell transcriptomic data from the model organism
Mus musculus comprising more than 100,000 cells from 20 organs and tissues. These data …
Mus musculus comprising more than 100,000 cells from 20 organs and tissues. These data …
Analysis of CDS-located miRNA target sites suggests that they can effectively inhibit translation
Most of what is presently known about how miRNAs regulate gene expression comes from
studies that characterized the regulatory effect of miRNA binding sites located in the 3′ …
studies that characterized the regulatory effect of miRNA binding sites located in the 3′ …
PAPD5, a noncanonical poly (A) polymerase with an unusual RNA-binding motif
PAPD5 is one of the seven members of the family of noncanonical poly(A) polymerases in
human cells. PAPD5 was shown to polyadenylate aberrant pre-ribosomal RNAs in vivo, …
human cells. PAPD5 was shown to polyadenylate aberrant pre-ribosomal RNAs in vivo, …
[HTML][HTML] Genome-wide transcriptional reorganization associated with senescence-to-immortality switch during human hepatocellular carcinogenesis
Senescence is a permanent proliferation arrest in response to cell stress such as DNA
damage. It contributes strongly to tissue aging and serves as a major barrier against tumor …
damage. It contributes strongly to tissue aging and serves as a major barrier against tumor …
Alternative polyadenylation of Pax3 controls muscle stem cell fate and muscle function
Adult stem cells are essential for tissue homeostasis. In skeletal muscle, muscle stem cells (MuSCs)
reside in a quiescent state, but little is known about the mechanisms that control …
reside in a quiescent state, but little is known about the mechanisms that control …
[HTML][HTML] Peripheral T-cells, B-cells, and monocytes from multiple sclerosis patients supplemented with high-dose vitamin d show distinct changes in gene expression …
Vitamin D is a steroid hormone that has been widely studied as a potential therapy for multiple
sclerosis and other inflammatory disorders. Pre-clinical studies have implicated vitamin D …
sclerosis and other inflammatory disorders. Pre-clinical studies have implicated vitamin D …
Argonaute CLIP–a method to identify in vivo targets of miRNAs
microRNAs are important regulators of gene expression that guide translational repression
and degradation of target mRNAs. Only relatively few miRNA targets have been characterized…
and degradation of target mRNAs. Only relatively few miRNA targets have been characterized…
Single-cell transcriptomic characterization of 20 organs and tissues from individual mice creates a Tabula Muris
…, AS Baghel, I Bakerman, I Bansal, D Berdnik, B Bilen… - BioRxiv, 2017 - biorxiv.org
We have created a compendium of single cell transcriptome data from the model organism
Mus musculus comprising nearly 100,000 cells from 20 organs and tissues. These data …
Mus musculus comprising nearly 100,000 cells from 20 organs and tissues. These data …
[PDF][PDF] Support vector clustering of microarray gene expression data
B Bilen - 2005 - Citeseer
In this paper Gaussian kernel approach will be explored for microarray gene expression data
using support vector clustering (SVC). SVC uses the idea of support vector machines. The …
using support vector clustering (SVC). SVC uses the idea of support vector machines. The …
Analyses and Web Interfaces for Protein Subcellular Localization and Gene Expression Data
B Bilen - 2007 - search.proquest.com
In order to benefit maximally from large scale molecular biology data generated by recent
developments, it is important to proceed in an organized manner by developing databases, …
developments, it is important to proceed in an organized manner by developing databases, …