User profiles for Blaise Ratcliffe

Blaise Ratcliffe

Scion NZ
Verified email at scionresearch.com
Cited by 809

[HTML][HTML] Quantitative genetics and genomics converge to accelerate forest tree breeding

…, BSF Müller, B Tan, F Isik, B Ratcliffe… - Frontiers in plant …, 2018 - frontiersin.org
Forest tree breeding has been successful at delivering genetically improved material for
multiple traits based on recurrent cycles of selection, mating, and testing. However, long …

[HTML][HTML] Prediction accuracies for growth and wood attributes of interior spruce in space using genotyping-by-sequencing

O Gamal El-Dien, B Ratcliffe, J Klápště, C Chen, I Porth… - BMC genomics, 2015 - Springer
Background Genomic selection (GS) in forestry can substantially reduce the length of
breeding cycle and increase gain per unit time through early selection and greater selection …

Single-Step BLUP with Varying Genotyping Effort in Open-Pollinated Picea glauca

B Ratcliffe, OG El-Dien, EP Cappa… - G3: Genes …, 2017 - academic.oup.com
Maximization of genetic gain in forest tree breeding programs is contingent on the accuracy
of the predicted breeding values and precision of the estimated genetic parameters. We …

Implementation of the realized genomic relationship matrix to open-pollinated white spruce family testing for disentangling additive from nonadditive genetic effects

O Gamal El-Dien, B Ratcliffe, J Klápště… - G3: Genes …, 2016 - academic.oup.com
The open-pollinated (OP) family testing combines the simplest known progeny evaluation
and quantitative genetics analyses as candidates’ offspring are assumed to represent …

[HTML][HTML] Genomic prediction accuracies in space and time for height and wood density of Douglas-fir using exome capture as the genotyping platform

FR Thistlethwaite, B Ratcliffe, J Klápště, I Porth, C Chen… - BMC genomics, 2017 - Springer
Background Genomic selection (GS) can offer unprecedented gains, in terms of cost efficiency
and generation turnover, to forest tree selective breeding; especially for late expressing …

[HTML][HTML] Genomic selection of juvenile height across a single-generational gap in Douglas-fir

FR Thistlethwaite, B Ratcliffe, J Klápště, I Porth, C Chen… - Heredity, 2019 - nature.com
Here, we perform cross-generational GS analysis on coastal Douglas-fir (Pseudotsuga
menziesii), reflecting trans-generational selective breeding application. A total of 1321 trees, …

[HTML][HTML] Linkage disequilibrium vs. pedigree: Genomic selection prediction accuracy in conifer species

FR Thistlethwaite, O Gamal El-Dien, B Ratcliffe… - PLoS …, 2020 - journals.plos.org
Background The presupposition of genomic selection (GS) is that predictive accuracies should
be based on population-wide linkage disequilibrium (LD). However, in species with large, …

[HTML][HTML] Integrating genomic information and productivity and climate-adaptability traits into a regional white spruce breeding program

…, JG Klutsch, J Sebastian-Azcona, B Ratcliffe… - PLoS …, 2022 - journals.plos.org
Tree improvement programs often focus on improving productivity-related traits; however,
under present climate change scenarios, climate change-related (adaptive) traits should also …

[HTML][HTML] Multiple-trait analyses improved the accuracy of genomic prediction and the power of genome-wide association of productivity and climate change-adaptive …

…, C Chen, JG Klutsch, J Sebastian-Azcona, B Ratcliffe… - BMC genomics, 2022 - Springer
Background Genomic prediction (GP) and genome-wide association (GWA) analyses are
currently being employed to accelerate breeding cycles and to identify alleles or genomic …

[HTML][HTML] Efficient genomics-based 'end-to-end' selective tree breeding framework

YA El-Kassaby, EP Cappa, C Chen, B Ratcliffe… - Heredity, 2024 - nature.com
Since their initiation in the 1950s, worldwide selective tree breeding programs followed the
recurrent selection scheme of repeated cycles of selection, breeding (mating), and testing …