User profiles for Boris N. Kholodenko

Boris Kholodenko

Professor of Systems Biology, University College Dublin
Verified email at ucd.ie
Cited by 18062

Cell-signalling dynamics in time and space

BN Kholodenko - Nature reviews Molecular cell biology, 2006 - nature.com
The specificity of cellular responses to receptor stimulation is encoded by the spatial and
temporal dynamics of downstream signalling networks. Temporal dynamics are coupled to …

Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades

NI Markevich, JB Hoek, BN Kholodenko - The Journal of cell biology, 2004 - rupress.org
… Hoek, Boris N. Kholodenko; Signaling switches and bistability arising from multisite
phosphorylation in protein kinase cascades . J Cell Biol 2 February 2004; 164 (3): 353–359. doi: https…

Negative feedback and ultrasensitivity can bring about oscillations in the mitogen‐activated protein kinase cascades

BN Kholodenko - European journal of biochemistry, 2000 - Wiley Online Library
Functional organization of signal transduction into protein phosphorylation cascades, such
as the mitogen‐activated protein kinase (MAPK) cascades, greatly enhances the sensitivity of …

[HTML][HTML] Quantification of short term signaling by the epidermal growth factor receptor

BN Kholodenko, OV Demin, G Moehren… - Journal of Biological …, 1999 - ASBMB
During the past decade, our knowledge of molecular mechanisms involved in growth factor
signaling has proliferated almost explosively. However, the kinetics and control of …

Signalling ballet in space and time

BN Kholodenko, JF Hancock, W Kolch - Nature reviews Molecular cell …, 2010 - nature.com
Although we have amassed extensive catalogues of signalling network components, our
understanding of the spatiotemporal control of emergent network structures has lagged behind. …

Cross-talk between mitogenic Ras/MAPK and survival PI3K/Akt pathways: a fine balance

…, A Kiyatkin, BN Kholodenko - Biochemical Society …, 2012 - portlandpress.com
In the present paper, we describe multiple levels of cross-talk between the PI3K (phosphoinositide
3-kinase)/Akt and Ras/MAPK (mitogen-activated protein kinase) signalling pathways. …

Untangling the wires: a strategy to trace functional interactions in signaling and gene networks

BN Kholodenko, A Kiyatkin… - Proceedings of the …, 2002 - National Acad Sciences
Emerging technologies have enabled the acquisition of large genomics and proteomics data
sets. However, current methodologies for analysis do not permit interpretation of the data in …

The dynamic control of signal transduction networks in cancer cells

…, M Halasz, M Granovskaya, BN Kholodenko - Nature Reviews …, 2015 - nature.com
Cancer is often considered a genetic disease. However, much of the enormous plasticity of
cancer cells to evolve different phenotypes, to adapt to challenging microenvironments and …

Ligand‐dependent responses of the ErbB signaling network: experimental and modeling analyses

…, BA Ogunnaike, JB Hoek, BN Kholodenko - Molecular systems …, 2007 - embopress.org
Deregulation of ErbB signaling plays a key role in the progression of multiple human cancers.
To help understand ErbB signaling quantitatively, in this work we combine traditional …

Systems‐level interactions between insulin–EGF networks amplify mitogenic signaling

…, J Timmer, JB Hoek, BN Kholodenko - Molecular systems …, 2009 - embopress.org
Crosstalk mechanisms have not been studied as thoroughly as individual signaling pathways.
We exploit experimental and computational approaches to reveal how a concordant …