User profiles for Bryan Pavlovic

Bryan Pavlovic

University of California San Francisco
Verified email at ucsf.edu
Cited by 1288

[PDF][PDF] Establishing cerebral organoids as models of human-specific brain evolution

…, JA West, M Bershteyn, CB Lowe, BJ Pavlovic… - Cell, 2019 - cell.com
Direct comparisons of human and non-human primate brains can reveal molecular pathways
underlying remarkable specializations of the human brain. However, chimpanzee tissue is …

[HTML][HTML] The functional consequences of variation in transcription factor binding

DA Cusanovich, B Pavlovic, JK Pritchard, Y Gilad - PLoS genetics, 2014 - journals.plos.org
One goal of human genetics is to understand how the information for precise and dynamic
gene expression programs is encoded in the genome. The interactions of transcription factors …

[HTML][HTML] Genetic variation, not cell type of origin, underlies the majority of identifiable regulatory differences in iPSCs

CK Burrows, NE Banovich, BJ Pavlovic… - PLoS …, 2016 - journals.plos.org
The advent of induced pluripotent stem cells (iPSCs) revolutionized human genetics by
allowing us to generate pluripotent cells from easily accessible somatic tissues. This technology …

A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics

I Gallego Romero, BJ Pavlovic, I Hernando-Herraez… - Elife, 2015 - elifesciences.org
10.7554/eLife.07103.001 Comparative genomics studies in primates are restricted due to
our limited access to samples. In order to gain better insight into the genetic processes that …

Impact of regulatory variation across human iPSCs and differentiated cells

…, CK Burrows, IG Romero, BJ Pavlovic… - Genome …, 2018 - genome.cshlp.org
Induced pluripotent stem cells (iPSCs) are an essential tool for studying cellular differentiation
and cell types that are otherwise difficult to access. We investigated the use of iPSCs and …

[HTML][HTML] A comparative assessment of human and chimpanzee iPSC-derived cardiomyocytes with primary heart tissues

BJ Pavlovic, LE Blake, J Roux, C Chavarria, Y Gilad - Scientific reports, 2018 - nature.com
Comparative genomic studies in primates have the potential to reveal the genetic and mechanistic
basis for human specific traits. These studies may also help us better understand inter-…

[PDF][PDF] Comparative landscape of genetic dependencies in human and chimpanzee stem cells

R She, T Fair, NK Schaefer, RA Saunders, BJ Pavlovic… - Cell, 2023 - cell.com
Comparative studies of great apes provide a window into our evolutionary past, but the extent
and identity of cellular differences that emerged during hominin evolution remain largely …

Gene expression variability in human and chimpanzee populations share common determinants

BJ Fair, LE Blake, A Sarkar, BJ Pavlovic, C Cuevas… - Elife, 2020 - elifesciences.org
Inter-individual variation in gene expression has been shown to be heritable and is often
associated with differences in disease susceptibility between individuals. Many studies focused …

[HTML][HTML] A comparative study of endoderm differentiation in humans and chimpanzees

…, CJ Hsiao, C Chavarria, M Myrthil, Y Gilad, BJ Pavlovic - Genome biology, 2018 - Springer
Background There is substantial interest in the evolutionary forces that shaped the regulatory
framework in early human development. Progress in this area has been slow because it is …

[HTML][HTML] Reprogramming LCLs to iPSCs results in recovery of donor-specific gene expression signature

SM Thomas, C Kagan, BJ Pavlovic, J Burnett… - PLoS …, 2015 - journals.plos.org
Renewable in vitro cell cultures, such as lymphoblastoid cell lines (LCLs), have facilitated
studies that contributed to our understanding of genetic influence on human traits. However, …