User profiles for C. N. Magnan

Christophe Magnan

NeoGenomics Laboratories
Verified email at neogenomics.com
Cited by 2578

SOLpro: accurate sequence-based prediction of protein solubility

CN Magnan, A Randall, P Baldi - Bioinformatics, 2009 - academic.oup.com
Motivation: Protein insolubility is a major obstacle for many experimental studies. A
sequence-based prediction method able to accurately predict the propensity of a protein to be …

SSpro/ACCpro 5: almost perfect prediction of protein secondary structure and relative solvent accessibility using profiles, machine learning and structural similarity

CN Magnan, P Baldi - Bioinformatics, 2014 - academic.oup.com
Motivation: Accurately predicting protein secondary structure and relative solvent accessibility
is important for the study of protein evolution, structure and function and as a component of …

High-throughput prediction of protein antigenicity using protein microarray data

CN Magnan, M Zeller, MA Kayala, A Vigil… - …, 2010 - academic.oup.com
Motivation: Discovery of novel protective antigens is fundamental to the development of
vaccines for existing and emerging pathogens. Most computational methods for predicting …

The neuron-specific chromatin regulatory subunit BAF53b is necessary for synaptic plasticity and memory

…, EA Kramár, S Azzawi, Y Chen, CN Magnan… - Nature …, 2013 - nature.com
Recent exome sequencing studies have implicated polymorphic Brg1-Associated Factor (BAF)
complexes (mammalian SWI/SNF chromatin remodeling complexes) in several human …

[PDF][PDF] Defining the independence of the liver circadian clock

…, VM Zinna, J Shi, M Samad, S Chen, CN Magnan… - Cell, 2019 - cell.com
Mammals rely on a network of circadian clocks to control daily systemic metabolism and
physiology. The central pacemaker in the suprachiasmatic nucleus (SCN) is considered …

[HTML][HTML] Epigenetic regulation of the circadian gene Per1 contributes to age-related changes in hippocampal memory

…, CM Michael, E Montellier, Y Liu, CN Magnan… - Nature …, 2018 - nature.com
Aging is accompanied by impairments in both circadian rhythmicity and long-term memory.
Although it is clear that memory performance is affected by circadian cycling, it is unknown …

[HTML][HTML] Mitochondrial mutations and polymorphisms in psychiatric disorders

…, S Lupoli, EN Smith, J Kelsoe, CN Magnan… - Frontiers in …, 2012 - frontiersin.org
Mitochondrial deficiencies with unknown causes have been observed in schizophrenia (SZ)
and bipolar disorder (BD) in imaging and postmortem studies. Polymorphisms and somatic …

SSpro/ACCpro 6: almost perfect prediction of protein secondary structure and relative solvent accessibility using profiles, deep learning and structural similarity

G Urban, CN Magnan, P Baldi - Bioinformatics, 2022 - academic.oup.com
Magnan should be regarded as Joint First Authors. … This article presents a new version
of the SSpro/ACCpro suite of secondary structure predictors (Magnan and Baldi, 2014), with …

Cn= cpcn

L Ralaivola, F Denis, CN Magnan - Proceedings of the 23rd …, 2006 - dl.acm.org
We address the issue of the learnability of concept classes under three classification noise
models in the probably approximately correct framework. After introducing the Class-…

Mutation of neuron-specific chromatin remodeling subunit BAF53b: rescue of plasticity and memory by manipulating actin remodeling

…, R Havekes, TJ Hemstedt, CN Magnan… - Learning & …, 2017 - learnmem.cshlp.org
Recent human exome-sequencing studies have implicated polymorphic Brg1-associated
factor (BAF) complexes (mammalian SWI/SNF chromatin remodeling complexes) in several …