[HTML][HTML] Telomere-to-telomere assemblies of 142 strains characterize the genome structural landscape in Saccharomyces cerevisiae
Pangenomes provide access to an accurate representation of the genetic diversity of
species, both in terms of sequence polymorphisms and structural variants (SVs). Here we …
species, both in terms of sequence polymorphisms and structural variants (SVs). Here we …
de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer
…, O Beluche, C Caradec, S Davidas, C Cruaud… - …, 2017 - academic.oup.com
… About 85% of A, T, C, and G homopolymers of size 2 were present correctly in … C and G
homopolymers. For size 7 homopolymers, it was 30% for A and T homopolymers and 35% for C …
homopolymers. For size 7 homopolymers, it was 30% for A and T homopolymers and 35% for C …
Genetic background determines metabolic phenotypes in the mouse
MF Champy, M Selloum, V Zeitler, C Caradec… - Mammalian …, 2008 - Springer
To evaluate the contribution of genetic background to phenotypic variation, we compared a
large range of biochemical and metabolic parameters at different ages of four inbred mice …
large range of biochemical and metabolic parameters at different ages of four inbred mice …
Mouse functional genomics requires standardization of mouse handling and housing conditions
…, M Selloum, L Piard, V Zeitler, C Caradec… - Mammalian …, 2004 - Springer
… Whole-blood samples were centrifuged at 3000 rpm for 10 min in a refrigerated centrifuge
(4C). Samples were centrifuged within 2 h of collection to prevent possible in vitro changes. …
(4C). Samples were centrifuged within 2 h of collection to prevent possible in vitro changes. …
[HTML][HTML] Dissociation of analgesic and hormonal responses to forced swim stress using opioid receptor knockout mice
…, C Gavériaux-Ruff, A Matifas, C Caradec… - …, 2006 - nature.com
… into a water bath set at 52C. Latency for tail-flick was measured with a 10-s cutoff time. For
the hot plate test, the mouse was placed on a 52C hot plate and latencies for frontpaw licking …
the hot plate test, the mouse was placed on a 52C hot plate and latencies for frontpaw licking …
[HTML][HTML] Variation of the meiotic recombination landscape and properties over a broad evolutionary distance in yeasts
C Brion, S Legrand, J Peter, C Caradec, D Pflieger… - PLoS …, 2017 - journals.plos.org
… Another hypothesis is that we enriched the instance of COs happening on the chromosome
C by selecting only full viable tetrads, as the absence of recombination on the Sakl0C-left …
C by selecting only full viable tetrads, as the absence of recombination on the Sakl0C-left …
142 telomere-to-telomere assemblies reveal the genome structural landscape in Saccharomyces cerevisiae
… We grew yeast cells cultures overnight at 30 C in 20 ml of YPD medium until early stationary
phase. We harvested cells by centrifugation and extracted total genomic DNA using the …
phase. We harvested cells by centrifugation and extracted total genomic DNA using the …
Contrasting Genomic Evolution Between Domesticated and Wild Kluyveromyces lactis Yeast Populations
…, C Bleykasten, K Freel, C Caradec… - Genome Biology and …, 2023 - academic.oup.com
… To obtain genomic DNA for 41 strains sequenced in the context of this study, isolates were
grown overnight at 30 C in 20 mL of YPD medium to early stationary phase before cells were …
grown overnight at 30 C in 20 mL of YPD medium to early stationary phase before cells were …
Pan-transcriptome reveals a large accessory genome contribution to gene expression variation in yeast
…, F Dutreux, N Vakirlis, E Teyssonniere, C Caradec… - BioRxiv, 2023 - biorxiv.org
… Contrasting to previous observations in a yeast cross6 and recent findings in a C. elegans
population5, the set of trans eQTL detected in our large dataset are not biased toward a few …
population5, the set of trans eQTL detected in our large dataset are not biased toward a few …
Benefits of direct colposcopic vision for optimal LLETZ procedure: a prospective multicenter study
…, A Atallah, V Lavoue, C Caradec… - Journal of Lower …, 2016 - journals.lww.com
Objective The aim of the study was to assess whether direct colposcopic vision (DCV) of the
cervix during large loop excision of the transformation zone (LLETZ) is associated with a …
cervix during large loop excision of the transformation zone (LLETZ) is associated with a …