User profiles for C. Hinchliff
Cody HinchliffUniversity of Idaho Verified email at uidaho.edu Cited by 1932 |
Synthesis of phylogeny and taxonomy into a comprehensive tree of life
CE Hinchliff, SA Smith, JF Allman… - Proceedings of the …, 2015 - National Acad Sciences
… the introduction of each accumulation node c: (i) Because c derives from path node x, … c and
every node in the path containing x (other than x); and (iii) edges are also created between c …
every node in the path containing x (other than x); and (iii) edges are also created between c …
Nested radiations and the pulse of angiosperm diversification: increased diversification rates often follow whole genome duplications
Our growing understanding of the plant tree of life provides a novel opportunity to uncover
the major drivers of angiosperm diversity. Using a time‐calibrated phylogeny, we …
the major drivers of angiosperm diversity. Using a time‐calibrated phylogeny, we …
The bien r package: A tool to access the Botanical Information and Ecology Network (BIEN) database
…, SM Durán, D Guaderrama, CE Hinchliff… - Methods in Ecology …, 2018 - Wiley Online Library
… data, containing roughly 81 million occurrence records from c. 375,000 species, c. 915,000
trait observations across 28 traits from c. 93,000 species, and co-occurrence records from …
trait observations across 28 traits from c. 93,000 species, and co-occurrence records from …
Quartet sampling distinguishes lack of support from conflicting support in the green plant tree of life
… Sampling (QS) procedure outlined here was inspired by aspects from several quartet-based
and concordance methods, most particularly the process originally outlined by Hinchliff and …
and concordance methods, most particularly the process originally outlined by Hinchliff and …
Using supermatrices for phylogenetic inquiry: an example using the sedges
CE Hinchliff, EH Roalson - Systematic Biology, 2013 - academic.oup.com
In this article, we use supermatrix data-mining methods to reconstruct a large, highly inclusive
phylogeny of Cyperaceae from nucleotide data available on GenBank. We explore the …
phylogeny of Cyperaceae from nucleotide data available on GenBank. We explore the …
Phylogenetic relationships in Eleocharis (Cyperaceae): C4 photosynthesis origins and patterns of diversification in the spikerushes
EH Roalson, CE Hinchliff, R Trevisan… - Systematic …, 2010 - ingentaconnect.com
… Four other samples we have measured for δ 13C are outside of the CIR expected for C 3
species, suggestive of possible C 3-C 4 intermediacy, two of which are in Clade 4 ( Fig. 2A ; E. …
species, suggestive of possible C 3-C 4 intermediacy, two of which are in Clade 4 ( Fig. 2A ; E. …
[HTML][HTML] Some limitations of public sequence data for phylogenetic inference (in plants)
CE Hinchliff, SA Smith - PLoS One, 2014 - journals.plos.org
… B and C: cumulative numbers of genera (B) and species (C) represented by sequences on
GenBank, with colors labeling major groups. Species representation continues to grow at a …
GenBank, with colors labeling major groups. Species representation continues to grow at a …
Phylesystem: a git-based data store for community-curated phylogenetic estimates
Motivation: Phylogenetic estimates from published studies can be archived using general
platforms like Dryad (Vision, 2010) or TreeBASE (Sanderson et al., 1994). Such services fulfill …
platforms like Dryad (Vision, 2010) or TreeBASE (Sanderson et al., 1994). Such services fulfill …
The origins of Eleocharis (Cyperaceae) and the status of Websteria, Egleria, and Chillania
CE Hinchliff, AE Lliully A, T Carey, EH Roalson - Taxon, 2010 - Wiley Online Library
… Urb.; C, idealized line drawing of the transverse stem section of Chillania pusilla Roivainen;
D, idealized drawing of the transverse stem section of Eleocharis tucumanensis Barros. …
D, idealized drawing of the transverse stem section of Eleocharis tucumanensis Barros. …
[HTML][HTML] Analyzing and synthesizing phylogenies using tree alignment graphs
… C) A synthetic tree resulting from preferring source blue, green, and taxonomic source trees.
… tree is the same graph node as the LICA for a,b,c,d in the black, blue and orange trees). It …
… tree is the same graph node as the LICA for a,b,c,d in the black, blue and orange trees). It …