[HTML][HTML] Hierarchized phosphotarget binding by the seven human 14-3-3 isoforms
G Gogl, KV Tugaeva, P Eberling, C Kostmann… - Nature …, 2021 - nature.com
The seven 14-3-3 isoforms are highly abundant human proteins encoded by similar yet
distinct genes. 14-3-3 proteins recognize phosphorylated motifs within numerous human and …
distinct genes. 14-3-3 proteins recognize phosphorylated motifs within numerous human and …
[HTML][HTML] Quantitative fragmentomics allow affinity mapping of interactomes
Human protein networks have been widely explored but most binding affinities remain
unknown, hindering quantitative interactome-function studies. Yet interactomes rely on minimal …
unknown, hindering quantitative interactome-function studies. Yet interactomes rely on minimal …
[PDF][PDF] Dual specificity PDZ-and 14-3-3-binding motifs: a structural and interactomics study
Protein-protein interaction motifs are often alterable by post-translational modifications. For
example, 19% of predicted human PDZ domain-binding motifs (PBMs) have been …
example, 19% of predicted human PDZ domain-binding motifs (PBMs) have been …
Structure of high-risk papillomavirus 31 E6 oncogenic protein and characterization of E6/E6AP/p53 complex formation
…, G Gogl, DI Frecot, A Bonhoure, C Kostmann… - Journal of …, 2020 - Am Soc Microbiol
The degradation of p53 is a hallmark of high-risk human papillomaviruses (HPVs) of the alpha
genus and HPV-related carcinogenicity. The oncoprotein E6 forms a ternary complex with …
genus and HPV-related carcinogenicity. The oncoprotein E6 forms a ternary complex with …
Rewiring of RSK–PDZ interactome by linear motif phosphorylation
…, F Durbesson, P Jane, Y Nomine, C Kostmann… - Journal of molecular …, 2019 - Elsevier
Phosphorylation of short linear peptide motifs is a widespread process for the dynamic
regulation of protein–protein interactions. However, the global impact of phosphorylation events …
regulation of protein–protein interactions. However, the global impact of phosphorylation events …
Small p53 derived peptide suitable for robust nanobodies dimerization
F Dietsch, Y Nominé, A Stoessel, C Kostmann… - Journal of …, 2021 - Elsevier
Bivalent V H Hs have been shown to display better functional affinity compared with their
monovalent counterparts. Bivalency can be achieved either by inserting a hinge region …
monovalent counterparts. Bivalency can be achieved either by inserting a hinge region …
[HTML][HTML] Interactomic affinity profiling by holdup assay: Acetylation and distal residues impact the PDZome-binding specificity of PTEN phosphatase
Protein domains often recognize short linear protein motifs composed of a core conserved
consensus sequence surrounded by less critical, modulatory positions. PTEN, a lipid …
consensus sequence surrounded by less critical, modulatory positions. PTEN, a lipid …
The Holdup Multiplex, an assay for high-throughput measurement of protein-ligand affinity constants using a mass-spectrometry readout
F Delalande, G Gogl, A Rohrbacher, C Kostmann… - BioRxiv, 2022 - biorxiv.org
The accurate description and subsequent modeling of protein interactomes requires
quantification of their affinities at proteome-wide scale. Here we develop and validate the Holdup …
quantification of their affinities at proteome-wide scale. Here we develop and validate the Holdup …
[HTML][HTML] Benchtop holdup assay for quantitative affinity-based analysis of sequence determinants of protein-motif interactions
…, KO Babah, G Gógl, P Eberling, C Kostmann… - Analytical …, 2020 - Elsevier
Many protein-protein interactions are mediated by short linear peptide motifs binding to
cognate proteins or protein domains. Such interactions often display affinities in the mid-…
cognate proteins or protein domains. Such interactions often display affinities in the mid-…
A scalable strategy to solve structures of PDZ domains and their complexes
A Cousido-Siah, L Carneiro, C Kostmann… - … Section D: Structural …, 2022 - scripts.iucr.org
The human PDZome represents one of the largest globular domain families in the human
proteome, with 266 instances. These globular domains typically interact with C-terminal …
proteome, with 266 instances. These globular domains typically interact with C-terminal …