User profiles for Carrie L. Partch

Carrie Partch

Professor of Biochemistry, UC Santa Cruz
Verified email at ucsc.edu
Cited by 5816

Molecular architecture of the mammalian circadian clock

CL Partch, CB Green, JS Takahashi - Trends in cell biology, 2014 - cell.com
Circadian clocks coordinate physiology and behavior with the 24h solar day to provide
temporal homeostasis with the external environment. The molecular clocks that drive these …

Analysis of protein stability and ligand interactions by thermal shift assay

K Huynh, CL Partch - Current protocols in protein science, 2015 - Wiley Online Library
Purification of recombinant proteins for biochemical assays and structural studies is time‐consuming
and presents inherent difficulties that depend on the optimization of protein stability. …

Antibacterial membrane attack by a pore-forming intestinal C-type lectin

…, H Zheng, MG Derebe, KM Callenberg, CL Partch… - Nature, 2014 - nature.com
Human body-surface epithelia coexist in close association with complex bacterial communities
and are protected by a variety of antibacterial proteins. C-type lectins of the RegIII family …

Role of structural plasticity in signal transduction by the cryptochrome blue-light photoreceptor

CL Partch, MW Clarkson, S Özgür, AL Lee… - Biochemistry, 2005 - ACS Publications
Cryptochromes are blue-light photoreceptors that regulate a variety of responses such as
growth and circadian rhythms in organisms ranging from bacteria to humans. Cryptochromes …

Structural basis of the day-night transition in a bacterial circadian clock

…, S Tripathi, SS Golden, A LiWang, CL Partch - Science, 2017 - science.org
Circadian clocks are ubiquitous timing systems that induce rhythms of biological activities in
synchrony with night and day. In cyanobacteria, timing is generated by a posttranslational …

Cryptochrome 1 regulates the circadian clock through dynamic interactions with the BMAL1 C terminus

…, C Ramanathan, HW Lee, AC Liu, CL Partch - Nature structural & …, 2015 - nature.com
The molecular circadian clock in mammals is generated from transcriptional activation by
the bHLH-PAS transcription factor CLOCK–BMAL1 and subsequent repression by PERIOD …

Molecular basis for peptidoglycan recognition by a bactericidal lectin

RE Lehotzky, CL Partch, S Mukherjee… - Proceedings of the …, 2010 - National Acad Sciences
RegIII proteins are secreted C-type lectins that kill Gram-positive bacteria and play a vital role
in antimicrobial protection of the mammalian gut. RegIII proteins bind their bacterial targets …

CK1δ/ε protein kinase primes the PER2 circadian phosphoswitch

…, JM Fustin, H Okamura, CL Partch… - Proceedings of the …, 2018 - National Acad Sciences
Multisite phosphorylation of the PERIOD 2 (PER2) protein is the key step that determines the
period of the mammalian circadian clock. Previous studies concluded that an unidentified …

Crystal structure of cryptochrome 3 from Arabidopsis thaliana and its implications for photolyase activity

…, R Baxter, BS Smith, CL Partch… - Proceedings of the …, 2006 - National Acad Sciences
Cryptochromes use near-UV/blue light to regulate a variety of growth and adaptive process.
Recent biochemical studies demonstrate that the Cryptochrome-Drosophila, Arabidopsis, …

Photochemistry and photobiology of cryptochrome blue‐light photopigments: the search for a photocycle

CL Partch, A Sancar - Photochemistry and photobiology, 2005 - Wiley Online Library
Cryptochromes are flavoproteins that exhibit high sequence and structural similarity to the
light‐dependent DNA‐repair enzyme, photolyase. Cryptochromes have lost the ability to …