User profiles for Casey A. Gifford

Casey A. Gifford

Stanford University School of Medicine
Verified email at stanford.edu
Cited by 4384

A Virulence Locus of Pseudomonas aeruginosa Encodes a Protein Secretion Apparatus

…, ME Cuff, S Raunser, A Shen, M Zhou, CA Gifford… - Science, 2006 - science.org
Bacterial pathogens frequently use protein secretion to mediate interactions with their hosts.
Here we found that a virulence locus (HSI-I) of Pseudomonas aeruginosa encodes a protein …

Targeted disruption of DNMT1, DNMT3A and DNMT3B in human embryonic stem cells

…, K Clement, AM Tsankov, V Akopian, CA Gifford… - Nature …, 2015 - nature.com
DNA methylation is a key epigenetic modification involved in regulating gene expression
and maintaining genomic integrity. Here we inactivated all three catalytically active DNA …

[HTML][HTML] Transcriptional and epigenetic dynamics during specification of human embryonic stem cells

CA Gifford, MJ Ziller, H Gu, C Trapnell, J Donaghey… - Cell, 2013 - cell.com
Differentiation of human embryonic stem cells (hESCs) provides a unique opportunity to
study the regulatory mechanisms that facilitate cellular transitions in a human context. To that …

Threonine phosphorylation post-translationally regulates protein secretion in Pseudomonas aeruginosa

JD Mougous, CA Gifford, TL Ramsdell… - Nature cell …, 2007 - nature.com
Secreted proteins are crucial to the arsenal of bacterial pathogens. Although optimal activity
of these proteins is likely to require precise regulation of release, the signalling events that …

A transcriptional switch governs fibroblast activation in heart disease

…, R Jain, TA McKinsey, MG Rosenfeld, CA Gifford… - Nature, 2021 - nature.com
In diseased organs, stress-activated signalling cascades alter chromatin, thereby triggering
maladaptive cell state transitions. Fibroblast activation is a common stress response in …

[PDF][PDF] Integrative analyses of human reprogramming reveal dynamic nature of induced pluripotency

…, X Zhang, SJH Sui, Z Wu, V Akopian, CA Gifford… - Cell, 2015 - cell.com
Induced pluripotency is a promising avenue for disease modeling and therapy, but the
molecular principles underlying this process, particularly in human cells, remain poorly …

Single-cell analysis of cardiogenesis reveals basis for organ-level developmental defects

…, HT Salunga, A Schricker, A Del Sol, CA Gifford… - Nature, 2019 - nature.com
Organogenesis involves integration of diverse cell types; dysregulation of cell-type-specific
gene networks results in birth defects, which affect 5% of live births. Congenital heart defects …

Dissecting neural differentiation regulatory networks through epigenetic footprinting

…, J Donaghey, R Pop, W Mallard, R Issner, CA Gifford… - Nature, 2015 - nature.com
Abstract Models derived from human pluripotent stem cells that accurately recapitulate
neural development in vitro and allow for the generation of specific neuronal subtypes are of …

A qPCR ScoreCard quantifies the differentiation potential of human pluripotent stem cells

…, V Akopian, R Pop, S Chetty, CA Gifford… - Nature …, 2015 - nature.com
Research on human pluripotent stem cells has been hampered by the lack of a standardized,
quantitative, scalable assay of pluripotency. We previously described an assay called …

Oligogenic inheritance of a human heart disease involving a genetic modifier

CA Gifford, SS Ranade, R Samarakoon, HT Salunga… - Science, 2019 - science.org
Complex genetic mechanisms are thought to underlie many human diseases, yet experimental
proof of this model has been elusive. Here, we show that a human cardiac anomaly can …