User profiles for Cedoljub Bundalovic-Torma

Cedoljub Bundalovic-Torma

Post Doctoral Fellow, Universiy of Toronto
Verified email at mail.utoronto.ca
Cited by 674

Diversity, Evolution, and Function of Pseudomonas syringae Effectoromes

C Bundalovic-Torma, F Lonjon… - Annual Review of …, 2022 - annualreviews.org
Pseudomonas syringae is an evolutionarily diverse bacterial species complex and a preeminent
model for the study of plant–pathogen interactions due in part to its remarkably broad …

[HTML][HTML] Evolutionary and structural analyses of SARS-CoV-2 D614G spike protein mutation now documented worldwide

…, JM Gutierrez, C Bundalovic-Torma… - Scientific reports, 2020 - nature.com
The COVID-19 pandemic, caused by the Severe Acute Respiratory Syndrome Coronavirus
2 (SARS-CoV-2), was declared on March 11, 2020 by the World Health Organization. As of …

[HTML][HTML] A systematic pipeline for classifying bacterial operons reveals the evolutionary landscape of biofilm machineries

C Bundalovic-Torma, GB Whitfield… - PLoS computational …, 2020 - journals.plos.org
In bacteria functionally related genes comprising metabolic pathways and protein complexes
are frequently encoded in operons and are widely conserved across phylogenetically …

[HTML][HTML] Quantitative Genome-Wide Genetic Interaction Screens Reveal Global Epistatic Relationships of Protein Complexes in Escherichia coli

M Babu, R Arnold, C Bundalovic-Torma… - PLoS …, 2014 - journals.plos.org
Large-scale proteomic analyses in Escherichia coli have documented the composition and
physical relationships of multiprotein complexes, but not their functional organization into …

Global landscape of cell envelope protein complexes in Escherichia coli

M Babu, C Bundalovic-Torma, C Calmettes… - Nature …, 2018 - nature.com
Bacterial cell envelope protein (CEP) complexes mediate a range of processes, including
membrane assembly, antibiotic resistance and metabolic coordination. However, only limited …

[PDF][PDF] Conditional epistatic interaction maps reveal global functional rewiring of genome integrity pathways in Escherichia coli

A Kumar, N Beloglazova, C Bundalovic-Torma… - Cell reports, 2016 - cell.com
As antibiotic resistance is increasingly becoming a public health concern, an improved
understanding of the bacterial DNA damage response (DDR), which is commonly targeted by …

[HTML][HTML] Discovery and characterization of a Gram-positive Pel polysaccharide biosynthetic gene cluster

GB Whitfield, LS Marmont, C Bundalovic-Torma… - PLoS …, 2020 - journals.plos.org
Our understanding of the biofilm matrix components utilized by Gram-positive bacteria, and
the signalling pathways that regulate their production are largely unknown. In a companion …

[HTML][HTML] Predictive modeling of Pseudomonas syringae virulence on bean using gradient boosted decision trees

…, M Greenberg, C Bundalovic-Torma… - PLoS …, 2022 - journals.plos.org
Pseudomonas syringae is a genetically diverse bacterial species complex responsible for
numerous agronomically important crop diseases. Individual P. syringae isolates are assigned …

[HTML][HTML] RecPD: a recombination-aware measure of phylogenetic diversity

C Bundalovic-Torma, D Desveaux… - PLoS Computational …, 2022 - journals.plos.org
A critical step in studying biological features (eg, genetic variants, gene families, metabolic
capabilities, or taxa) is assessing their diversity and distribution among a sample of …

Comparative Genomics and Evolutionary Modularity of Prokaryotes

C Bundalovic-Torma, J Parkinson - Prokaryotic Systems Biology, 2015 - Springer
The soaring number of high-quality genomic sequences has ushered in the era of post-genomic
research where our understanding of organisms has dramatically shifted towards …