User profiles for Chandra Sekhar Pedamallu
Chandra Sekhar PedamalluCurrent : Excelra; Previous : Sanofi, DFCI; HMS; Broad Inst.; NEB Inc. Verified email at sanofi.com Cited by 51655 |
[PDF][PDF] The immune landscape of cancer
We performed an extensive immunogenomic analysis of more than 10,000 tumors comprising
33 diverse cancer types by utilizing data compiled by TCGA. Across cancer types, we …
33 diverse cancer types by utilizing data compiled by TCGA. Across cancer types, we …
[PDF][PDF] Integrated genomic characterization of papillary thyroid carcinoma
Papillary thyroid carcinoma (PTC) is the most common type of thyroid cancer. Here, we
describe the genomic landscape of 496 PTCs. We observed a low frequency of somatic …
describe the genomic landscape of 496 PTCs. We observed a low frequency of somatic …
[PDF][PDF] Comprehensive molecular characterization of muscle-invasive bladder cancer
…, VS Chagas, KL Mungall, S Sadeghi, CS Pedamallu… - Cell, 2017 - cell.com
We report a comprehensive analysis of 412 muscle-invasive bladder cancers characterized
by multiple TCGA analytical platforms. Fifty-eight genes were significantly mutated, and the …
by multiple TCGA analytical platforms. Fifty-eight genes were significantly mutated, and the …
[HTML][HTML] Prospective derivation of a living organoid biobank of colorectal cancer patients
In Rspondin-based 3D cultures, Lgr5 stem cells from multiple organs form ever-expanding
epithelial organoids that retain their tissue identity. We report the establishment of tumor …
epithelial organoids that retain their tissue identity. We report the establishment of tumor …
Genomic analysis identifies association of Fusobacterium with colorectal carcinoma
The tumor microenvironment of colorectal carcinoma is a complex community of genomically
altered cancer cells, nonneoplastic cells, and a diverse collection of microorganisms. Each …
altered cancer cells, nonneoplastic cells, and a diverse collection of microorganisms. Each …
[PDF][PDF] Comprehensive and integrative genomic characterization of hepatocellular carcinoma
…, SE Schumacher, G Saksena, CS Pedamallu… - Cell, 2017 - cell.com
Liver cancer has the second highest worldwide cancer mortality rate and has limited
therapeutic options. We analyzed 363 hepatocellular carcinoma (HCC) cases by whole-exome …
therapeutic options. We analyzed 363 hepatocellular carcinoma (HCC) cases by whole-exome …
The genetic landscape of high-risk neuroblastoma
…, L Lichenstein, A McKenna, CS Pedamallu… - Nature …, 2013 - nature.com
Neuroblastoma is a malignancy of the developing sympathetic nervous system that often
presents with widespread metastatic disease, resulting in survival rates of less than 50%. To …
presents with widespread metastatic disease, resulting in survival rates of less than 50%. To …
Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas
To compare lung adenocarcinoma (ADC) and lung squamous cell carcinoma (SqCC) and to
identify new drivers of lung carcinogenesis, we examined the exome sequences and copy …
identify new drivers of lung carcinogenesis, we examined the exome sequences and copy …
Landscape of genomic alterations in cervical carcinomas
AI Ojesina, L Lichtenstein, SS Freeman, CS Pedamallu… - Nature, 2014 - nature.com
Cervical cancer is responsible for 10–15% of cancer-related deaths in women worldwide 1 ,
2 . The aetiological role of infection with high-risk human papilloma viruses (HPVs) in …
2 . The aetiological role of infection with high-risk human papilloma viruses (HPVs) in …
[PDF][PDF] Integrative genomic analysis of cholangiocarcinoma identifies distinct IDH-mutant molecular profiles
Cholangiocarcinoma (CCA) is an aggressive malignancy of the bile ducts, with poor
prognosis and limited treatment options. Here, we describe the integrated analysis of somatic …
prognosis and limited treatment options. Here, we describe the integrated analysis of somatic …