User profiles for Chandra Sekhar Pedamallu

Chandra Sekhar Pedamallu

Current : Excelra; Previous : Sanofi, DFCI; HMS; Broad Inst.; NEB Inc.
Verified email at sanofi.com
Cited by 51655

[PDF][PDF] The immune landscape of cancer

…, H Hu, TM Malta, H Noushmehr, CS Pedamallu… - Immunity, 2018 - cell.com
We performed an extensive immunogenomic analysis of more than 10,000 tumors comprising
33 diverse cancer types by utilizing data compiled by TCGA. Across cancer types, we …

[PDF][PDF] Integrated genomic characterization of papillary thyroid carcinoma

…, PJ Park, JS Parker, EO Paull, CS Pedamallu… - Cell, 2014 - cell.com
Papillary thyroid carcinoma (PTC) is the most common type of thyroid cancer. Here, we
describe the genomic landscape of 496 PTCs. We observed a low frequency of somatic …

[PDF][PDF] Comprehensive molecular characterization of muscle-invasive bladder cancer

…, VS Chagas, KL Mungall, S Sadeghi, CS Pedamallu… - Cell, 2017 - cell.com
We report a comprehensive analysis of 412 muscle-invasive bladder cancers characterized
by multiple TCGA analytical platforms. Fifty-eight genes were significantly mutated, and the …

[HTML][HTML] Prospective derivation of a living organoid biobank of colorectal cancer patients

…, P van Sluis, VSW Li, S Seepo, CS Pedamallu… - Cell, 2015 - cell.com
In Rspondin-based 3D cultures, Lgr5 stem cells from multiple organs form ever-expanding
epithelial organoids that retain their tissue identity. We report the establishment of tumor …

Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

AD Kostic, D Gevers, CS Pedamallu… - Genome …, 2012 - genome.cshlp.org
The tumor microenvironment of colorectal carcinoma is a complex community of genomically
altered cancer cells, nonneoplastic cells, and a diverse collection of microorganisms. Each …

[PDF][PDF] Comprehensive and integrative genomic characterization of hepatocellular carcinoma

…, SE Schumacher, G Saksena, CS Pedamallu… - Cell, 2017 - cell.com
Liver cancer has the second highest worldwide cancer mortality rate and has limited
therapeutic options. We analyzed 363 hepatocellular carcinoma (HCC) cases by whole-exome …

The genetic landscape of high-risk neuroblastoma

…, L Lichenstein, A McKenna, CS Pedamallu… - Nature …, 2013 - nature.com
Neuroblastoma is a malignancy of the developing sympathetic nervous system that often
presents with widespread metastatic disease, resulting in survival rates of less than 50%. To …

Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas

…, J Kim, J Wala, AH Berger, CS Pedamallu… - Nature …, 2016 - nature.com
To compare lung adenocarcinoma (ADC) and lung squamous cell carcinoma (SqCC) and to
identify new drivers of lung carcinogenesis, we examined the exome sequences and copy …

Landscape of genomic alterations in cervical carcinomas

AI Ojesina, L Lichtenstein, SS Freeman, CS Pedamallu… - Nature, 2014 - nature.com
Cervical cancer is responsible for 10–15% of cancer-related deaths in women worldwide 1 ,
2 . The aetiological role of infection with high-risk human papilloma viruses (HPVs) in …

[PDF][PDF] Integrative genomic analysis of cholangiocarcinoma identifies distinct IDH-mutant molecular profiles

…, JD Yang, E Reznik, S Sadeghi, CS Pedamallu… - Cell reports, 2017 - cell.com
Cholangiocarcinoma (CCA) is an aggressive malignancy of the bile ducts, with poor
prognosis and limited treatment options. Here, we describe the integrated analysis of somatic …