User profiles for Chengtao Li

Chengtao Li

Galixir
Verified email at galixir.com
Cited by 3118

Representation learning on graphs with jumping knowledge networks

K Xu, C Li, Y Tian, T Sonobe… - International …, 2018 - proceedings.mlr.press
Recent deep learning approaches for representation learning on graphs follow a neighborhood
aggregation procedure. We analyze some important properties of these models, and …

Fast dpp sampling for nystrom with application to kernel methods

C Li, S Jegelka, S Sra - International Conference on …, 2016 - proceedings.mlr.press
The Nystrom method has long been popular for scaling up kernel methods. Its theoretical
guarantees and empirical performance rely critically on the quality of the landmarks selected. …

Effect of LDPE and biodegradable PBAT primary microplastics on bacterial community after four months of soil incubation

C Li, Q Cui, Y Li, K Zhang, X Lu, Y Zhang - Journal of hazardous materials, 2022 - Elsevier
Biodegradable plastics would be gradually degraded by microbes after being used and
discarded, forming biodegradable microplastics (BMPs). It is however not clear if it, like …

Retro*: learning retrosynthetic planning with neural guided A* search

B Chen, C Li, H Dai, L Song - International conference on …, 2020 - proceedings.mlr.press
Retrosynthetic planning is a critical task in organic chemistry which identifies a series of
reactions that can lead to the synthesis of a target product. The vast number of possible chemical …

Association between indel polymorphism in the promoter region of lncRNA GAS5 and the risk of hepatocellular carcinoma

…, C Li, H Zhao, Y He, S Zhu, J Xu, Y Jiang, L Li… - …, 2015 - academic.oup.com
The growth arrest special 5 (GAS5) is known to be involved in various cancers. However, its
expression regulation remains unclear. Polymorphisms in the promoter region of GAS5 may …

Improving sequential determinantal point processes for supervised video summarization

A Sharghi, A Borji, C Li, T Yang… - Proceedings of the …, 2018 - openaccess.thecvf.com
It is now much easier than ever before to produce videos. While the ubiquitous video data is
a great source for information discovery and extraction, the computational challenges are …

Tankbind: Trigonometry-aware neural networks for drug-protein binding structure prediction

W Lu, Q Wu, J Zhang, J Rao, C Li… - Advances in neural …, 2022 - proceedings.neurips.cc
Illuminating interactions between proteins and small drug molecules is a long-standing
challenge in the field of drug discovery. Despite the importance of understanding these …

Accelerated rational PROTAC design via deep learning and molecular simulations

S Zheng, Y Tan, Z Wang, C Li, Z Zhang… - Nature Machine …, 2022 - nature.com
Proteolysis-targeting chimeras (PROTACs) have emerged as effective tools to selectively
degrade disease-related proteins by using the ubiquitin-proteasome system. Developing …

Retrosynthesis prediction with conditional graph logic network

H Dai, C Li, C Coley, B Dai… - Advances in Neural …, 2019 - proceedings.neurips.cc
Retrosynthesis is one of the fundamental problems in organic chemistry. The task is to identify
reactants that can be used to synthesize a specified product molecule. Recently, computer-…

[HTML][HTML] Deep learning driven biosynthetic pathways navigation for natural products with BioNavi-NP

S Zheng, T Zeng, C Li, B Chen, CW Coley… - Nature …, 2022 - nature.com
The complete biosynthetic pathways are unknown for most natural products (NPs), it is thus
valuable to make computer-aided bio-retrosynthesis predictions. Here, a navigable and user-…