User profiles for Chih-Hao Hsu

Chih-Hao Hsu

Lawrence Berkeley National Laboratory, University of Akron
Verified email at zips.uakron.edu
Cited by 2126

Validating the AMRFinder tool and resistance gene database by using antimicrobial resistance genotype-phenotype correlations in a collection of isolates

…, I Tolstoy, GH Tyson, S Zhao, CH Hsu… - Antimicrobial agents …, 2019 - Am Soc Microbiol
Antimicrobial resistance (AMR) is a major public health problem that requires publicly
available tools for rapid analysis. To identify AMR genes in whole-genome sequences, the …

Selective assemblies of giant tetrahedra via precisely controlled positional interactions

M Huang, CH Hsu, J Wang, S Mei, X Dong, Y Li, M Li… - Science, 2015 - science.org
Self-assembly of rigid building blocks with explicit shape and symmetry is substantially
influenced by the geometric factors and remains largely unexplored. We report the selective …

BRD4 is a histone acetyltransferase that evicts nucleosomes from chromatin

…, C Case-Borden, A Gegonne, CH Hsu… - Nature structural & …, 2016 - nature.com
Bromodomain protein 4 (BRD4) is a chromatin-binding protein implicated in cancer and
autoimmune diseases that functions as a scaffold for transcription factors at promoters and super…

A Children's Oncology Group and TARGET initiative exploring the genetic landscape of Wilms tumor

…, JMG Auvil, D Meerzaman, QR Chen, CH Hsu… - Nature …, 2017 - nature.com
We performed genome-wide sequencing and analyzed mRNA and miRNA expression, DNA
copy number, and DNA methylation in 117 Wilms tumors, followed by targeted sequencing …

[PDF][PDF] Recurrent DGCR8, DROSHA, and SIX homeodomain mutations in favorable histology Wilms tumors

…, JMG Auvil, D Meerzaman, QR Chen, CH Hsu… - Cancer cell, 2015 - cell.com
We report the most common single-nucleotide substitution/deletion mutations in favorable
histology Wilms tumors (FHWTs) to occur within SIX1/2 (7% of 534 tumors) and microRNA …

OmicCircos: a simple-to-use R package for the circular visualization of multidimensional omics data

Y Hu, C Yan, CH Hsu, QR Chen, K Niu… - Cancer …, 2014 - journals.sagepub.com
OmicCircos is an R software package used to generate high-quality circular plots for
visualizing genomic variations, including mutation patterns, copy number variations (CNVs), …

Comparative analysis of extended-spectrum-β-lactamase CTX-M-65-producing Salmonella enterica serovar Infantis isolates from humans, food animals, and retail …

H Tate, JP Folster, CH Hsu, J Chen… - Antimicrobial Agents …, 2017 - Am Soc Microbiol
We sequenced the genomes of 10 Salmonella enterica serovar Infantis isolates containing
bla CTX-M-65 obtained from chicken, cattle, and human sources collected between 2012 and …

Intraspecific phylogenetic analysis of Siberian woolly mammoths using complete mitochondrial genomes

…, SYW Ho, J Qi, A Ratan, CH Hsu… - Proceedings of the …, 2008 - National Acad Sciences
We report five new complete mitochondrial DNA (mtDNA) genomes of Siberian woolly mammoth
(Mammuthus primigenius), sequenced with up to 73-fold coverage from DNA extracted …

The mcr-9 Gene of Salmonella and Escherichia coli Is Not Associated with Colistin Resistance in the United States

GH Tyson, C Li, CH Hsu, S Ayers… - Antimicrobial Agents …, 2020 - Am Soc Microbiol
Reports of transmissible colistin resistance show the importance of comprehensive colistin
resistance surveillance. Recently, a new allele of the mobile colistin resistance (mcr) gene …

Identification of a Frank–Kasper Z phase from shape amphiphile self-assembly

Z Su, CH Hsu, Z Gong, X Feng, J Huang, R Zhang… - Nature …, 2019 - nature.com
Frank–Kasper phases, a family of ordered structures formed from particles with spherical
motifs, are found in a host of materials, such as metal alloys, inorganic colloids and various …