User profiles for Chris Dupont

Chris Dupont

- Verified email at jcvi.org - Cited by 14212

Christopher D. Dupont

- Verified email at mit.edu - Cited by 1112

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

…, A Salamov, N Putnam, C Dupont… - Proceedings of the …, 2007 - National Acad Sciences
The smallest known eukaryotes, at ≈1-μm diameter, are Ostreococcus tauri and related
species of marine phytoplankton. The genome of Ostreococcus lucimarinus has been …

Evolution and metabolic significance of the urea cycle in photosynthetic diatoms

AE Allen, CL Dupont, M Oborník, A Horák… - Nature, 2011 - nature.com
Diatoms dominate the biomass of phytoplankton in nutrient-rich conditions and form the basis
of some of the world’s most productive marine food webs 1 , 2 , 3 , 4 . The diatom nuclear …

Microbial metagenomics: beyond the genome

JA Gilbert, CL Dupont - Annual review of marine science, 2011 - annualreviews.org
Metagenomics literally means “beyond the genome.” Marine microbial metagenomic databases
presently comprise ∼400 billion base pairs of DNA, only ∼3% of that found in 1 ml of …

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

CL Dupont, DB Rusch, S Yooseph… - The ISME …, 2012 - academic.oup.com
Bacteria in the 16S rRNA clade SAR86 are among the most abundant uncultivated constituents
of microbial assemblages in the surface ocean for which little genomic information is …

Copper toxicity and the origin of bacterial resistance—new insights and applications

CL Dupont, G Grass, C Rensing - Metallomics, 2011 - academic.oup.com
The bioavailability of different metals has likely changed over the course of Earth’s history.
Based on geochemical models, copper became much more bioavailable with the advent of an …

[HTML][HTML] Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus

…, R Sanges, A Toseland, BJ Ward, AE Allen, CL Dupont… - Nature, 2017 - nature.com
The Southern Ocean houses a diverse and productive community of organisms 1 , 2 .
Unicellular eukaryotic diatoms are the main primary producers in this environment, where …

Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton

…, JH Lee, BJ Binder, CL DuPont… - Proceedings of the …, 2010 - National Acad Sciences
Among eukaryotes, four major phytoplankton lineages are responsible for marine photosynthesis;
prymnesiophytes, alveolates, stramenopiles, and prasinophytes. Contributions by …

Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment

B Palenik, Q Ren, CL Dupont… - Proceedings of the …, 2006 - National Acad Sciences
Coastal aquatic environments are typically more highly productive and dynamic than open
ocean ones. Despite these differences, cyanobacteria from the genus Synechococcus are …

[HTML][HTML] Functional tradeoffs underpin salinity-driven divergence in microbial community composition

CL Dupont, J Larsson, S Yooseph, K Ininbergs, J Goll… - PloS one, 2014 - journals.plos.org
Bacterial community composition and functional potential change subtly across gradients in
the surface ocean. In contrast, while there are significant phylogenetic divergences between …

[PDF][PDF] Host genetic control of the oral microbiome in health and disease

…, JM Craig, SK Highlander, MB Jones, CL Dupont… - Cell host & …, 2017 - cell.com
Host-associated microbial communities are influenced by both host genetics and environmental
factors. However, factors controlling the human oral microbiome and their impact on …