Protter: interactive protein feature visualization and integration with experimental proteomic data
The ability to integrate and visualize experimental proteomic evidence in the context of rich
protein feature annotations represents an unmet need of the proteomics community. Here we …
protein feature annotations represents an unmet need of the proteomics community. Here we …
[HTML][HTML] Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms
…, X Yap, LG Monahan, R Cavaliere, CH Ahrens… - Nature …, 2016 - nature.com
Many bacteria produce extracellular and surface-associated components such as membrane
vesicles (MVs), extracellular DNA and moonlighting cytosolic proteins for which the …
vesicles (MVs), extracellular DNA and moonlighting cytosolic proteins for which the …
Generating and navigating proteome maps using mass spectrometry
Proteomes, the ensembles of all proteins expressed by cells or tissues, are typically
analysed by mass spectrometry. Recent technical and computational advances have greatly …
analysed by mass spectrometry. Recent technical and computational advances have greatly …
Identification of genes involved in DNA replication of the Autographa californica baculovirus.
By use of a transient replication assay, nine genes involved in DNA replication were identified
in the genome of the Autographa californica baculovirus. Six genes encoding helicase, …
in the genome of the Autographa californica baculovirus. Six genes encoding helicase, …
A high-quality catalog of the Drosophila melanogaster proteome
Understanding how proteins and their complex interaction networks convert the genomic
information into a dynamic living organism is a fundamental challenge in biological sciences. …
information into a dynamic living organism is a fundamental challenge in biological sciences. …
[HTML][HTML] Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes
The nematode Caenorhabditis elegans is a popular model system in genetics, not least
because a majority of human disease genes are conserved in C. elegans . To generate a …
because a majority of human disease genes are conserved in C. elegans . To generate a …
Genome-Wide Transcript Analysis of Bradyrhizobium japonicum Bacteroids in Soybean Root Nodules
The transcriptome of endosymbiotic Bradyrhizobium japonicum bacteroids was assessed,
using RNA extracted from determinate soybean root nodules. Results were compared with the …
using RNA extracted from determinate soybean root nodules. Results were compared with the …
Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover
Many bacterial pathogens produce diffusible signal factor (DSF)-type quorum sensing (QS)
signals in modulation of virulence and biofilm formation. Previous work on Xanthomonas …
signals in modulation of virulence and biofilm formation. Previous work on Xanthomonas …
[HTML][HTML] Identification and Functional Characterization of N-Terminally Acetylated Proteins in Drosophila melanogaster
Protein modifications play a major role for most biological processes in living organisms.
Amino-terminal acetylation of proteins is a common modification found throughout the tree of life…
Amino-terminal acetylation of proteins is a common modification found throughout the tree of life…
Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function
Pollen, the male gametophyte of flowering plants, represents an ideal biological system to
study developmental processes, such as cell polarity, tip growth, and morphogenesis. Upon …
study developmental processes, such as cell polarity, tip growth, and morphogenesis. Upon …